Protein Info for MPMX19_03426 in Azospirillum sp. SherDot2

Annotation: Trans-aconitate 2-methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 475 PF13432: TPR_16" amino acids 50 to 111 (62 residues), 32.9 bits, see alignment E=6.8e-11 amino acids 116 to 177 (62 residues), 34.4 bits, see alignment E=2.4e-11 amino acids 185 to 246 (62 residues), 18.2 bits, see alignment E=2.7e-06 PF13431: TPR_17" amino acids 66 to 97 (32 residues), 22.1 bits, see alignment (E = 1.2e-07) PF13374: TPR_10" amino acids 80 to 104 (25 residues), 15.8 bits, see alignment (E = 1.1e-05) PF14559: TPR_19" amino acids 89 to 153 (65 residues), 35.8 bits, see alignment E=7.4e-12 PF13181: TPR_8" amino acids 112 to 144 (33 residues), 12.6 bits, see alignment (E = 0.00012) amino acids 215 to 246 (32 residues), 17.2 bits, see alignment (E = 4e-06) PF13176: TPR_7" amino acids 216 to 247 (32 residues), 17.5 bits, see alignment (E = 3.2e-06) PF01209: Ubie_methyltran" amino acids 264 to 408 (145 residues), 28.2 bits, see alignment E=1.1e-09 PF13489: Methyltransf_23" amino acids 300 to 416 (117 residues), 56 bits, see alignment E=3.5e-18 PF13847: Methyltransf_31" amino acids 311 to 410 (100 residues), 42 bits, see alignment E=7.7e-14 PF05401: NodS" amino acids 311 to 397 (87 residues), 28.7 bits, see alignment E=1e-09 PF13649: Methyltransf_25" amino acids 316 to 405 (90 residues), 52.3 bits, see alignment E=7e-17 PF08242: Methyltransf_12" amino acids 317 to 407 (91 residues), 56.7 bits, see alignment E=3e-18 PF08241: Methyltransf_11" amino acids 317 to 409 (93 residues), 56.5 bits, see alignment E=3.2e-18

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (475 amino acids)

>MPMX19_03426 Trans-aconitate 2-methyltransferase (Azospirillum sp. SherDot2)
MDEASATMAPAMAQPSVAGTPSPRHAPSLQTPSFQAGEIPDEIRAKVEDGTALLRQGRFA
EAADLFGDAIAAQPDWPMPYNNLAVALRGMGRLDEALLACAAALRHRPDYPEAFANLARI
LLAQNRYRDAALAAEQAAKLRPDHSAMHALRAMALLKDQAPAEALPVCRAALALDPAGTE
VLAVQAQALDAVGRSAEALSAARRGAALDPLRRESLIVLGSLLVNRNHRDEALAVYRRAM
ELNPDDTVLAHLVHAIAGTTSAKAPEAYVANVFDSYADRFDEHLVKTLQYKAHEIVARTA
VAALPATLSADGGARILDIGCGTGLCGPILRPAASRLVGVDLSARMLDKARDRSLYDLLA
QAELVQFMTGTGERFDAVVSADVLCYIGDLTEVFRAAAGVLEPGGLLAFTVERQEDPGYR
LTPSGRYVHGLDHLRSSARGLFRARTIDNVILRTEASVPVHGYLCMFQRLPHAVH