Protein Info for MPMX19_03341 in Azospirillum sp. SherDot2

Annotation: Cobalt-zinc-cadmium resistance protein CzcA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1037 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details transmembrane" amino acids 338 to 356 (19 residues), see Phobius details amino acids 361 to 381 (21 residues), see Phobius details amino acids 441 to 460 (20 residues), see Phobius details amino acids 471 to 497 (27 residues), see Phobius details amino acids 532 to 551 (20 residues), see Phobius details amino acids 857 to 874 (18 residues), see Phobius details amino acids 881 to 904 (24 residues), see Phobius details amino acids 910 to 928 (19 residues), see Phobius details amino acids 958 to 978 (21 residues), see Phobius details amino acids 990 to 1013 (24 residues), see Phobius details TIGR00914: heavy metal efflux pump, CzcA family" amino acids 1 to 1016 (1016 residues), 703.6 bits, see alignment E=2.1e-215 PF00873: ACR_tran" amino acids 7 to 1016 (1010 residues), 798.9 bits, see alignment E=6.6e-244

Best Hits

KEGG orthology group: K07239, heavy-metal exporter, HME family (inferred from 95% identity to azl:AZL_b00580)

Predicted SEED Role

"Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1037 amino acids)

>MPMX19_03341 Cobalt-zinc-cadmium resistance protein CzcA (Azospirillum sp. SherDot2)
MFTFLVGISLRQRPLVLIAALLITGWGVLIARDMPIDLLPDLHPPMVTIVTEAGGYAPEE
VEQLITYPMELVLNGMPGVSRIRSASSPGFSLIYVEFVWGTDPLRNRQLVMERLAMARER
LPDDITPNLAPMSSVMGLAMQLVVQAPGMDPMTLRELADWTIRPRLMAVEGVSQVYVVGG
DVRQYRFTPNPVAMNMLGITLTQVEQSLNDFGRNSSGGFNDLYNTEFIIRNVGRSRSLDD
LRSLVVTYRDGRPVLLSQIGDVSFAAKVKRGEGSFNGEPAVLMAILKHPAANSVALAGRV
EDMLAELAPSLPPGVEARKISYSQADLISSSVENVEDVLRDAIVIVAVVLAAFLWSVRTT
AISLLAIPVSLIVTIIALKLMGSTINTMTLGGIAIGIGQLVDDSVVYVENTLRRLGDNRR
RHRPLEVIEVIMRASQEVRSGIIYATAIILLVFLPLFALPGEQGRLFGPLGIAYIVSIFA
SLLVSLTVTPALCAYLLPNMKHLEESHDGRLIRWLKRLNGRVLGWSLDNPRALLGATAGL
VVLSALALPLLPRSFLPSFNEGTLYVQLLNRPGISLAESSRVGAMAEQIILQVPEVVSVA
RRTGRNEDDEDADPVNSSEFPIRVRLDGRSRAEVIEDLRDRLSVLPVDLTVTQFLTSRME
VAQNGVRGAIVMKIFGEDLGTLRMLAGRFREKFDEIPGLRDLLVEQQVQVPQIRITLDYE
RAKLFGVTPAQLAEALESLSNGHTVSQVIDGGKRFDVVLRLSDADRTPETLAQMRMETPA
GYVPLSSVATIVNAAGPNQIMRESGMRRIVLTANTDGSDMSAIVAQMRAKIAATPLPSGY
NTLLEGSFRQEEESRPVMAGLCAVSIALVFLVLYQRYRSVVLSLIVMANIPLALIGCVAA
LVVFGQDLSLAAMIGFIAVTGVAVRNGVLKISHFINLALHEGVPTGRVLIMRGCEERLTP
VLMTALSAGLALIPLLFSSDMPGTEILHPVAVAIFGGLISSTLLDTLTTPVLFQCFGQDA
LERLRVVAEGDLAGETF