Protein Info for MPMX19_03170 in Azospirillum sp. SherDot2

Annotation: L-lactate transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 426 transmembrane" amino acids 17 to 42 (26 residues), see Phobius details amino acids 58 to 79 (22 residues), see Phobius details amino acids 87 to 105 (19 residues), see Phobius details amino acids 111 to 134 (24 residues), see Phobius details amino acids 145 to 166 (22 residues), see Phobius details amino acids 174 to 195 (22 residues), see Phobius details amino acids 213 to 226 (14 residues), see Phobius details amino acids 239 to 262 (24 residues), see Phobius details amino acids 276 to 297 (22 residues), see Phobius details amino acids 305 to 322 (18 residues), see Phobius details amino acids 327 to 346 (20 residues), see Phobius details amino acids 364 to 385 (22 residues), see Phobius details amino acids 394 to 415 (22 residues), see Phobius details PF07690: MFS_1" amino acids 26 to 380 (355 residues), 129.7 bits, see alignment E=6.2e-42 amino acids 295 to 418 (124 residues), 34 bits, see alignment E=8e-13

Best Hits

KEGG orthology group: None (inferred from 95% identity to azl:AZL_a07600)

Predicted SEED Role

"MFS permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (426 amino acids)

>MPMX19_03170 L-lactate transporter (Azospirillum sp. SherDot2)
MLSTPLAAALARRDIHYAWVVVAVTFLSMLVSAGAVGAPGVLLLPLQREFGWDTADISTA
MAIRLLLFGLMGPFAAAMINRFGVRRMVLSSLTLVGSGLLASLAMREVWQLILLWGFVVG
FGTGLTAMVLGATIATRWFVARRGLVIGLLTASSATGQLVFMPLLSMLTEAYGWRTAIAL
LCGLIAVAALAMLALMRDRPADLGLSAVGEVGAAAPAVPAGAILSAALGALRDAAGTRAF
WVLFATFFICGASTNGLIQTHLIPLCVDFNVPEVQAAGLLALMGIFDFVGTVGSGWLSDR
YDNRWLLVWYYGLRGLSLLYLPYSDFTLYGLSVFAVFYGLDWIATVPPTVRLTAERFGRE
RANLVFGWIFAGHQLGAASAAFGAGLSRTALQTYLPAFATAGALCLLAAVLVPLVGSRAK
PVAAAD