Protein Info for MPMX19_03130 in Azospirillum sp. SherDot2

Annotation: Anaerobic nitric oxide reductase transcription regulator NorR

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 475 PF08448: PAS_4" amino acids 20 to 118 (99 residues), 25.8 bits, see alignment E=3.1e-09 PF00158: Sigma54_activat" amino acids 160 to 328 (169 residues), 221.8 bits, see alignment E=1.4e-69 PF14532: Sigma54_activ_2" amino acids 161 to 332 (172 residues), 66.7 bits, see alignment E=7.8e-22 PF07728: AAA_5" amino acids 184 to 304 (121 residues), 30.1 bits, see alignment E=1.3e-10 PF02954: HTH_8" amino acids 427 to 466 (40 residues), 42.7 bits, see alignment 1.1e-14

Best Hits

KEGG orthology group: None (inferred from 73% identity to rpc:RPC_2009)

Predicted SEED Role

"FIG000557: hypothetical protein co-occurring with RecR"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (475 amino acids)

>MPMX19_03130 Anaerobic nitric oxide reductase transcription regulator NorR (Azospirillum sp. SherDot2)
MPTDRSQQFAAACALMAMVDEMIDGALLVDRDARIVWSNDRHVWFTEKLMAQLGLQSRAD
AIGLPVERVIPHSRMREVVETGRSMPLDIMRYGEHTLLVSRLPLRDETGEVIGALAFALK
NSLTYLRPIADRFNKLQSRLTRVEQELAASRASKYTVENLIGFSPAMLQVKRLVRRAGQI
NSAVLLLGETGTGKELVAQSIHACSDRAHRPFVGVNTAAIPENLLEAEFFGVAPGAYTGA
GRQPRPGKFQLADGGTLFLDEIGDMPLPLQAKLLRALQEREVEPLGSNQVVKVDVRIIAA
TSRPLAEMVRSGAFRPDLYYRLNVFPIQLPALRDRRDDLEILASLFSEKVALSLDQPMRD
LTPSALDALRRHDWPGNIRELANVIEQVYVRTEGDRILADDFADILPDAPLDRPAVAEER
RPLAAAMDDLERSLILEALAGCRGNKLEAARSLGLSRTNLYAKLRKHGIPVQPDD