Protein Info for MPMX19_02997 in Azospirillum sp. SherDot2

Annotation: Multidrug export protein EmrB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 526 transmembrane" amino acids 21 to 43 (23 residues), see Phobius details amino acids 67 to 89 (23 residues), see Phobius details amino acids 95 to 114 (20 residues), see Phobius details amino acids 120 to 142 (23 residues), see Phobius details amino acids 149 to 171 (23 residues), see Phobius details amino acids 183 to 204 (22 residues), see Phobius details amino acids 217 to 235 (19 residues), see Phobius details amino acids 247 to 265 (19 residues), see Phobius details amino acids 285 to 305 (21 residues), see Phobius details amino acids 325 to 343 (19 residues), see Phobius details amino acids 350 to 371 (22 residues), see Phobius details amino acids 383 to 401 (19 residues), see Phobius details amino acids 495 to 520 (26 residues), see Phobius details PF07690: MFS_1" amino acids 33 to 427 (395 residues), 84.5 bits, see alignment E=3.7e-28

Best Hits

KEGG orthology group: None (inferred from 42% identity to bbt:BBta_1623)

Predicted SEED Role

"major facilitator superfamily MFS_1"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (526 amino acids)

>MPMX19_02997 Multidrug export protein EmrB (Azospirillum sp. SherDot2)
MSVGLAGGRLSRLLLRPAQPILTHHPIVGLLGVMLGALISTLTSRITTFGLADIRGAIGA
GFDEGAWITTAYTVAQMLVAPAAAFLGVVFGPRRVLLVSSLTYGLAMLALPLTGTLTGVL
TFQLLAGLSSGTFIPLTIGFIVRNLPPRYVVYGIAVYAMNVELSLNFAASVEGWVIEHLD
WRWLFWDTALLAPLMALCVHFGMPAEPVRRDLLKDGDWWGIAYASLGFALLYAGLDQGNR
LDWFNSGLIVGLFLSGGLLIGAFVVQELTCPKPWITFSALFRGNIPLLCLLLVLLRLVML
STAYLVPQFMITVNNYRALEVGDTLLLIALPQFLLAPLVGTLLRHADPRVVMAAGFAAVG
LACWLASHLTADWVGADFLPSQMLQAFGQSFAMTSLIYFNIKNLSQAHILALGALLQTSR
LLGGELGAAFMQTFVRVREQFHSFRLVSDVVAGGTDTVHRLAGGMARLAARSTGPEEATD
RALSLLAAAVRKQAYVLAYIDGFVVIAWFIVGGLLLIALLRPAPKQ