Protein Info for MPMX19_02985 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 309 transmembrane" amino acids 33 to 57 (25 residues), see Phobius details amino acids 93 to 114 (22 residues), see Phobius details amino acids 122 to 140 (19 residues), see Phobius details amino acids 145 to 166 (22 residues), see Phobius details amino acids 177 to 197 (21 residues), see Phobius details amino acids 208 to 224 (17 residues), see Phobius details amino acids 231 to 253 (23 residues), see Phobius details amino acids 273 to 296 (24 residues), see Phobius details PF00528: BPD_transp_1" amino acids 131 to 305 (175 residues), 35.4 bits, see alignment E=4.5e-13

Best Hits

KEGG orthology group: K02054, putative spermidine/putrescine transport system permease protein (inferred from 71% identity to vei:Veis_0202)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (309 amino acids)

>MPMX19_02985 hypothetical protein (Azospirillum sp. SherDot2)
MSMAASTETHASGTQASAAPPPRRPRRWPWTPYLLSAPGLALFAVLLLVPLAMTFLLSLN
SFSFYGGIENVWQIGNYADIIADSYFHEVFLRTFRIAAVVTLLCALFGAPEAYILRRMKS
PWRGLCLLVVLGPLLISVVSRTLGWALLFGSTGLVNQGLIGLGLIATPIEFMYTETGVII
ALTHVLVPFMVLSVWASLQRLDPQVENAALSLGAGPLTVMRRVVLPQIVPGILSGSIIVF
ALAASAFATPAIIGGRRLKVAATLAYDEFLNTLNWPLGATVAVLLLIANVVIIVGCNRLV
ERRYKQVFE