Protein Info for MPMX19_02898 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 456 PF01266: DAO" amino acids 9 to 198 (190 residues), 31.2 bits, see alignment E=4.5e-11 PF00890: FAD_binding_2" amino acids 9 to 423 (415 residues), 97.1 bits, see alignment E=3.4e-31 PF12831: FAD_oxidored" amino acids 9 to 98 (90 residues), 36.2 bits, see alignment E=1.2e-12 TIGR02485: precorrin 3B synthase CobZ" amino acids 9 to 454 (446 residues), 494.2 bits, see alignment E=1.6e-152 PF13450: NAD_binding_8" amino acids 12 to 70 (59 residues), 28.3 bits, see alignment E=4.3e-10

Best Hits

KEGG orthology group: K13796, tricarballylate dehydrogenase (inferred from 76% identity to azl:AZL_b02750)

Predicted SEED Role

"TcuA: flavoprotein used to oxidize tricarballylate to cis-aconitate" in subsystem Tricarballylate Utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (456 amino acids)

>MPMX19_02898 hypothetical protein (Azospirillum sp. SherDot2)
MTCVSCDCDVLVVGGGNAALCAAIAARRAGASVLLLEAAPKSLRGGNARHSRNMRVMHDA
PTPWVRGYYPADDYHADLQRVAGAAVNSVDDGLARQFIDASADIVDWLAGNGVRFHRGTD
EVLPYSRKTAFFLGGGKALINALYAAAEALGVVVRYDSAVRALHLRDGPPAVTVGDVDIA
IRARALVVTSGGFQADLGWLRQQWGGAAGDFTIRGTPHATGVPLKALLEDGADPVGAADR
CHMVAVDGRAPLFDGGIVTRLDGLPHGIVVDRDGRRFADEGAVVGSSRYTTWGELVARCP
GAVAFSVFDSAIAGRFQPSIFPAIQADSIGGLASALGIGPPALESTVAAFNAAVTGGGTT
AGIDPPKTRLAVPITVPPFGAYPVRAGVTSTCLGVRVDGRARVLRPDGTAIDGVHAAGVI
MAPNILGTGYLAGSAMTIGTVFGRIAGREAATHALR