Protein Info for MPMX19_02870 in Azospirillum sp. SherDot2

Annotation: Serine/threonine-protein kinase PknD

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1681 transmembrane" amino acids 631 to 650 (20 residues), see Phobius details PF07714: PK_Tyr_Ser-Thr" amino acids 112 to 261 (150 residues), 55.7 bits, see alignment E=2.7e-18 PF00069: Pkinase" amino acids 117 to 264 (148 residues), 72.1 bits, see alignment E=2.9e-23 PF13191: AAA_16" amino acids 305 to 493 (189 residues), 129.7 bits, see alignment E=9.2e-41 PF13401: AAA_22" amino acids 329 to 496 (168 residues), 29.8 bits, see alignment E=3.6e-10 PF13185: GAF_2" amino acids 1325 to 1469 (145 residues), 45.4 bits, see alignment E=5.3e-15 PF13492: GAF_3" amino acids 1327 to 1469 (143 residues), 27.6 bits, see alignment E=1.9e-09 PF01590: GAF" amino acids 1327 to 1468 (142 residues), 41.4 bits, see alignment E=1.1e-13 PF07536: HWE_HK" amino acids 1482 to 1560 (79 residues), 25.5 bits, see alignment 1e-08 PF07568: HisKA_2" amino acids 1482 to 1557 (76 residues), 89.6 bits, see alignment 6.3e-29 PF13581: HATPase_c_2" amino acids 1574 to 1635 (62 residues), 28.2 bits, see alignment (E = 9e-10) PF02518: HATPase_c" amino acids 1585 to 1674 (90 residues), 40.6 bits, see alignment 1.8e-13

Best Hits

KEGG orthology group: None (inferred from 87% identity to azl:AZL_b02960)

Predicted SEED Role

"Signal transduction histidine kinase CheA (EC 2.7.3.-)" in subsystem Bacterial Chemotaxis or Flagellar motility or Two-component regulatory systems in Campylobacter (EC 2.7.3.-)

Isozymes

Compare fitness of predicted isozymes for: 2.7.3.-

Use Curated BLAST to search for 2.7.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1681 amino acids)

>MPMX19_02870 Serine/threonine-protein kinase PknD (Azospirillum sp. SherDot2)
MESSLDHLTETGSGTHALGGDGETRLLRVTRPGQPFPILARMAEPGVPTDAVLARLRQEH
ELSPLLDPAWAVKPLELLRHGAVPVLTLADPGGQPLPALSLSMPAVSAGAFRQRLSLAIR
IAAAVARLHRRGILHGDLRPFNLLVGEDGAVRLTGFGRAADLSAPQRQEVERPAALLPYM
APEQSGRMNRPVDRRSDLYALGVTLYELFTGELPFAARDAMEWVHSHLARAPIPPATHAP
DLPPAMSGILLRLLAKTAEDRYQTADGLVRDLTHALQLWDGQGRIPAFPPGSRDLPEGLE
PPASLYGREEPVAVLQAAFDRVAGRGRMGIVLISGRSGVGKSAVVHALEEQLVPPRGLFA
AGKFDQGRRDLPYASLAEAFRSLIARLLALPVPHRDQWSRGLADAVGDGGALMTALIPNL
ALLIGEQPAVPPLPPQEAQNRFDLLFRRVLQLFARADHPLVLFLDDLQWLDHATLDLLNR
LVADGGIGHLLLIGAYRSDEVGPDHPLAALLERIRRSAAEPAEAEIDCCEIALGPLSSDD
LRRMVSDSLDRKPDEVAALAALLEERTGGNAFFAVQLLTALERSGRLWFDREAKRWDWDM
AAVETARSGASIATLMTERLGRFPARARDLLARLAALGASAPLTTLALAAGLTEAETRRD
LEPVLAEGLILRSDGGYRFLHDRVQEGAYALVPAEGRSRLHLDIARALHRGFAADLSGGR
LFALVGQYDRCLSLIQDGREREEVATLHLAAGHQAKAASAHGSALAYALAGLRLLEGGQW
ERRHRLAFALEHLQAECEFLSGDLQRAELRLLGLVGRSGCPADRAAITALLVTVYTAIDR
SDRAIDACLAYLRGAGIDWPAHPPAALAHEEYARLREAIGGRPISSLAALSAVNDPDSRA
TLDVLAAALPPAFFSDRNLVCLILCRMANLTLQHGRSDASALGFAYLGMMAGPYFGDYDA
GYAFGRLGYDLAERHGRTRYRARVLMTFAYHVVPWTRDIRSERPLLLRAFEEAREAGDVT
YGGFTSVTLVTSMLASGDPLATVQRTAEARLAYVRQVKFGLCADILTTQLQLVRALRGRT
DELGSFDGRGFDNAAFEARLLANPSLDIATCWHWIRTLQLRCIAGRMAAAVEAAERAEGL
LWTTSGHWEMAEFHFHAALARAGAMDGAEPEERARHAVALSRHLNQLREWAGHSPDSFDA
RFALAEAEAARTQGRTEDAMRGYDRAVLAARRNALPHVEALAHECAAGLYRRMGVPTLEL
ACIREAADRYARWGATGKVRQLARRHPSLTLESGEAVMPEAPRGFDGVDLASLLETLRTV
SDQAGVEQLTATLLTLVLEHAGASRGLLILARGERLRVEAEATIGLYGVSVRLVQEDADR
FPLPHTIIHGAVRDQEAVIVDDTRAAGPLSADPYFQETEARSILCLPLVRRRRVVGLLHL
ENALATYAFTPQRVNVLTLLGAQAAASLETATLEEKDALLKEIHHRVKNNLQLVTSLLNL
QSRRIEDKAVAALFADSRDRVRSMALVHESLYRLGNFAWVPMREHLESVCAHLLRAYSRN
AGAVRLETELDDLKLDLDRAVPCGLIVNELISNALKHAFPGGQGGVLRIALTTDGQECRL
SVRDDGVGLPEGCDPDRMESVGFQLVSDLTSQLHGALKYRSGAGSEFIVTFPLKGRNRGS
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