Protein Info for MPMX19_02828 in Azospirillum sp. SherDot2

Annotation: Glutathione import ATP-binding protein GsiA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 548 PF00005: ABC_tran" amino acids 26 to 185 (160 residues), 100 bits, see alignment E=7.3e-32 amino acids 304 to 453 (150 residues), 117.7 bits, see alignment E=2.5e-37 PF08352: oligo_HPY" amino acids 236 to 275 (40 residues), 31.2 bits, see alignment 9.7e-11 amino acids 505 to 530 (26 residues), 20.1 bits, see alignment (E = 2.7e-07)

Best Hits

KEGG orthology group: K02031, peptide/nickel transport system ATP-binding protein K02032, peptide/nickel transport system ATP-binding protein (inferred from 95% identity to azl:AZL_b03250)

Predicted SEED Role

"Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)" in subsystem ABC transporter oligopeptide (TC 3.A.1.5.1) (TC 3.A.1.5.1)

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (548 amino acids)

>MPMX19_02828 Glutathione import ATP-binding protein GsiA (Azospirillum sp. SherDot2)
MTTPLLDVRGLSIALPPGADRPLAVDNLTFTLNPDEILCVVGESGSGKSMTAHAMMGLLP
APHVRVAGGSLLFKGKDVLAMPEAEQRSLRGGRIAMVFQEPMTALNPLMRVGRQIGESLR
EHTDLPAPARRARVVELLTQVGLPNPAELAEAYPFRLSGGQRQRVMIAMALACQPDILIA
DEPTTALDVTTQKQILDLIRSIQAERHMGMMFITHDFGVVAEIAHRVAVMRHGKLVEYGA
ASDVLNRPQHPYTRQLIASVPHYIEHRDDHARTGAPLLVADKVRKVFNVGGGLFKKSKQV
VAGDDLSLTIHPGETVGLVGESGSGKSTLGRSIVGLIKPDSGRILFEGTDLLALDRKGFR
PYRRAVQMVFQDPYASLNPRHRVGDIVAQGPVAFGEDRNRALTRARELLAMVGLDGSAAD
RFPHEFSGGQRQRIGIARALAMEPKLLVADEPVSALDVSVQGQVLDLLDDIRRRLNLAML
FITHDLRVAAQVCDTIAVMRRGKIVEMGTARDVFTHPRDAYTRSLLDAIPGKAWHIPEDL
QQAPAGAH