Protein Info for MPMX19_02818 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 490 signal peptide" amino acids 1 to 36 (36 residues), see Phobius details transmembrane" amino acids 37 to 44 (8 residues), see Phobius details amino acids 65 to 83 (19 residues), see Phobius details amino acids 103 to 131 (29 residues), see Phobius details amino acids 178 to 199 (22 residues), see Phobius details amino acids 211 to 232 (22 residues), see Phobius details amino acids 237 to 256 (20 residues), see Phobius details amino acids 268 to 285 (18 residues), see Phobius details amino acids 308 to 330 (23 residues), see Phobius details amino acids 342 to 369 (28 residues), see Phobius details amino acids 377 to 398 (22 residues), see Phobius details amino acids 413 to 451 (39 residues), see Phobius details amino acids 463 to 484 (22 residues), see Phobius details PF02652: Lactate_perm" amino acids 7 to 247 (241 residues), 33.3 bits, see alignment E=1.2e-12 amino acids 308 to 480 (173 residues), 68.3 bits, see alignment E=3e-23

Best Hits

Predicted SEED Role

"L-lactate permease" in subsystem Lactate utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (490 amino acids)

>MPMX19_02818 hypothetical protein (Azospirillum sp. SherDot2)
MTLAFHMMPLVGTILLLASRRVSLLSAGIAGMALALVTMVAPMLMAQPSAGPVLGLAAVK
AGEGAWLAWHAMSIIAAGLLFHRAFEARGTRTAAVAQENRRRAVFVACFLVGPFAESVTG
FGVGLVVALAMLRSLGLPPVQSAALGLFSQVLAAWGAMGVGSRVGAELIGVSFTELGTAS
ALLMAVVLPCLLPVFWGLIQSSGLRSTLRERATDVALLLCLAGLIWLTNRFVAPELGGGL
ATAILLLVVEGPRLLRSGTGVREMAERLWPYGLLIAGLMATRLLPPLSDWTGQWLVLDPF
GGLAPLALLRHPATWLVLIAGILLAGLPGAEAGNVVRGALRAALVPMAATLVFVEFATFM
AASGGAAMFGNAWREVAGRFAVLASPVFGAAAGMLTGSNTASNALMMHIQLSLAAESGLP
SILIAAVQTVAGSICTMLTPGRIVLAAGLVGLERSEGAIYRRALPIGLATILALLAVIVA
MTGFKAGGLV