Protein Info for MPMX19_02761 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 699 signal peptide" amino acids 9 to 11 (3 residues), see Phobius details transmembrane" amino acids 12 to 29 (18 residues), see Phobius details amino acids 328 to 349 (22 residues), see Phobius details PF00672: HAMP" amino acids 348 to 397 (50 residues), 35.9 bits, see alignment 7.8e-13 PF00015: MCPsignal" amino acids 519 to 666 (148 residues), 106.5 bits, see alignment E=1.5e-34

Best Hits

KEGG orthology group: None (inferred from 91% identity to azl:AZL_026780)

Predicted SEED Role

"Methyl-accepting chemotaxis protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (699 amino acids)

>MPMX19_02761 hypothetical protein (Azospirillum sp. SherDot2)
MIQLRKTSLRAVLSVVIGTIGLLAVFTSVSDLVDTARNARDAGRVATLAATSQQLYEALR
SVRLERATTLVPLRAETAADEATVKSVAELRGKAEAAFAPGMAALDRLDPAGFGKYAMAI
RSSHDALNELRGRVDTALRTPKAARDRAAADSWPKVTDAYLAAVQAATDAVDAGIALVDP
TTDQLLALKRAAWVVRLRTSTEILSASTAIGEGRPWTQAEILTAAEERGRIDTAWTLITA
AAKRPDTPRRIVEAVEAAQSKFFETGGARRKIVLDALSTGGKPDITAEAWVKREAADQAP
LNALVNAALEEMVAHADWKAGQAERELFTQSVILALAIGLSVAGLLLVWRRVTRPIHILT
VAIDRLAQRDYEVELPNDGRGDEIGRMQQALLVLRDNGRQHADMVQAQVAAQAAAAARTT
AVDRLCGDFSGRVGTSLRSVESAAAHLMGTSAAVTRISEQSAGDSGAVAAAAHEASAGVE
TVAAAAQELSASIGEISRRMAESATISQDAIERTERTDRIIVELAAASEAIGAIVTLIGD
IAGQTNLLALNATIEAARAGEAGKGFAVVASEVKGLATQTGRATQDITDRIARIQAMTQD
AVDGVRSVSTVIRQMNGVTTGIVAAVEEQGAATSEIARNVQEVATAAGRISASISDLART
VEQSRTVAADVLEAAELMNRQAEALKDDVGGFLAEIRRA