Protein Info for MPMX19_02571 in Azospirillum sp. SherDot2

Annotation: Chromosome partitioning protein ParA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 265 PF10609: ParA" amino acids 10 to 142 (133 residues), 38 bits, see alignment E=4.6e-13 PF13614: AAA_31" amino acids 10 to 185 (176 residues), 216.9 bits, see alignment E=7e-68 PF09140: MipZ" amino acids 11 to 49 (39 residues), 32.6 bits, see alignment 1.9e-11 PF06564: CBP_BcsQ" amino acids 11 to 152 (142 residues), 36 bits, see alignment E=2e-12 PF01656: CbiA" amino acids 12 to 236 (225 residues), 114.9 bits, see alignment E=8.5e-37 PF00142: Fer4_NifH" amino acids 17 to 52 (36 residues), 29.6 bits, see alignment 1.8e-10 PF02374: ArsA_ATPase" amino acids 17 to 53 (37 residues), 26.9 bits, see alignment 1e-09

Best Hits

Swiss-Prot: 63% identical to PARA_CAUVN: Chromosome partitioning protein ParA (parA) from Caulobacter vibrioides (strain NA1000 / CB15N)

KEGG orthology group: K03496, chromosome partitioning protein (inferred from 99% identity to azl:AZL_000140)

Predicted SEED Role

"Chromosome (plasmid) partitioning protein ParA" in subsystem Bacterial Cytoskeleton or Plasmid replication or Two cell division clusters relating to chromosome partitioning

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (265 amino acids)

>MPMX19_02571 Chromosome partitioning protein ParA (Azospirillum sp. SherDot2)
MSAVTRPLARVVAIANQKGGVGKTTTTINLATALAVIGKRVLVIDLDPQGNASTGLGIPR
SDRRVGIYDVLFDDVSLEEAATPSSVPNLSIITSSVDLSGAEIELVGAERREFRLREAVA
NSALEYDYVLIDCPPALGLLTLNALVASHAVMVPLQCEFYALEGLSHLVRTIERVKRAFN
PNLDIHGVVLTMFDKRNNLSDMVAADVRGFFGEKVYDTVIPRNVKVSEAPSHGKPVLIYD
MRCPGSQAYIHLAGEVLRREKRLTA