Protein Info for MPMX19_02431 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 622 PF00027: cNMP_binding" amino acids 39 to 124 (86 residues), 30 bits, see alignment E=8.5e-11 PF00571: CBS" amino acids 166 to 213 (48 residues), 23.4 bits, see alignment 1.3e-08 amino acids 231 to 278 (48 residues), 29.9 bits, see alignment 1.1e-10 PF03445: DUF294" amino acids 304 to 433 (130 residues), 138.5 bits, see alignment E=2.8e-44 PF10335: DUF294_C" amino acids 471 to 618 (148 residues), 120.7 bits, see alignment E=8.8e-39

Best Hits

KEGG orthology group: K07182, CBS domain-containing protein (inferred from 90% identity to azl:AZL_001540)

Predicted SEED Role

"Predicted signal-transduction protein containing cAMP-binding and CBS domains" in subsystem cAMP signaling in bacteria

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (622 amino acids)

>MPMX19_02431 hypothetical protein (Azospirillum sp. SherDot2)
MQHAMPTASPDFDFGQPPFDLLTGDQRTALAGALDIALYPRDAVLLSREEPTDAMFVVLR
GTVQERRGGEVAAVHGPGDRFGLQALYGAAGAGAGGSSARRFVAAEECACHLIPRPALEA
LSAENPEFGAAIIGDFAQRMRDLAALRSNREMAALTMARIRQAYLHPPLFVDAAASLRDA
AEAMKQNCASSVLVRGADGTVGILTGTDLRDLVVLAGRPVSEPVGPLARYGLLTLDRDDL
LFNALVLMTKHAVRRVVVTENGAIVGLLGQSDLLAVLSNHSQVIGLQVEHATDPADLRRA
SRAIVELIRTLHATGVKVSFIADLVTELNRRIFRKLFELLAPPDLLANSCLIVMGSEGRG
EQLLKTDQDNGLILRDGFDCPDLADIAADFTRHLVEFGYPPCPGNIMVSNPEWTRPLAGY
KDALFNWVHRPDEAAQMNLAIFYDAAPVAGDATLLAEAKDYLLSRLQDNQMFFTQFARPA
LSFDTPSGLFAALFERRRAEAVDIKKAGIFPIVHGVRALALEKHRVETNTVERIQVLAEL
GALDRKMAADLVEAFTILSTIRLKARVDLPDDGPEGEGAELAIDNLVHPDRLGKLDRDQF
KDCLALVKSFKELIAHHFRLNH