Protein Info for MPMX19_02374 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 563 transmembrane" amino acids 31 to 54 (24 residues), see Phobius details amino acids 283 to 305 (23 residues), see Phobius details PF07568: HisKA_2" amino acids 356 to 429 (74 residues), 77.8 bits, see alignment E=1.1e-25 PF07536: HWE_HK" amino acids 356 to 409 (54 residues), 24.7 bits, see alignment 6.6e-09 PF13581: HATPase_c_2" amino acids 441 to 549 (109 residues), 43.5 bits, see alignment E=6e-15 PF02518: HATPase_c" amino acids 453 to 552 (100 residues), 52.5 bits, see alignment E=1.2e-17

Best Hits

KEGG orthology group: None (inferred from 83% identity to azl:AZL_002050)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (563 amino acids)

>MPMX19_02374 hypothetical protein (Azospirillum sp. SherDot2)
MKWPYLQMVSDTMPLRALRSQSSPLYRLPGSALVLIACTAAVLLTIGLSAVFAWRDRNEA
VQQATGVAGNIGLLAAEHAARLIESGDLLLTQTATLAGQAGTLLPDDVATRDRMALLAAS
APHVVGLEIRDAAGALRLSSLPDAAPGAGMTALKPNGMTIGSGRMGRRAVVVLAQPLPGG
TAASGSGAAPRGWAVAGLDARAFRDVYRSLDVGYGHSISIMLPDGTPLLREPEGGGTTGG
NPGDEAASHADDITVTRPIGDTGLSAAVTITTESVLRRWSERLWIYAAFAAAACATVAVI
GALAIQRARKEREAEDALQHAYDTLEENVHQRTAQLERANAQLEAAVTDKEVLLKEVQHR
VKNNLQVICSLLRLQAARIDERARRGFDESLRRIQTMSLLHELLHRSAEPAHINFADALR
QMCDGLVRSDNPTAARLELEAQDWIVDADRATPLAIATSELVSNALLHAFPHGHPGTVRV
LLEREENGMRLIVRDNGVGLPAGMPSQHKRPSRGGASSGLGLNLVQALSHQAGATLKIER
DGGTIFTLTIPNLPVRQHAKSAA