Protein Info for MPMX19_02302 in Azospirillum sp. SherDot2

Annotation: putative chromate transport protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 439 transmembrane" amino acids 16 to 35 (20 residues), see Phobius details amino acids 85 to 107 (23 residues), see Phobius details amino acids 113 to 135 (23 residues), see Phobius details amino acids 147 to 176 (30 residues), see Phobius details amino acids 217 to 239 (23 residues), see Phobius details amino acids 248 to 270 (23 residues), see Phobius details amino acids 322 to 347 (26 residues), see Phobius details amino acids 359 to 385 (27 residues), see Phobius details amino acids 393 to 411 (19 residues), see Phobius details amino acids 417 to 436 (20 residues), see Phobius details PF02417: Chromate_transp" amino acids 15 to 176 (162 residues), 143.8 bits, see alignment E=2.6e-46 amino acids 248 to 430 (183 residues), 114.9 bits, see alignment E=2e-37 TIGR00937: chromate efflux transporter" amino acids 19 to 429 (411 residues), 223.1 bits, see alignment E=4.2e-70

Best Hits

KEGG orthology group: K07240, chromate transporter (inferred from 53% identity to mch:Mchl_4736)

Predicted SEED Role

"Chromate transport protein ChrA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (439 amino acids)

>MPMX19_02302 putative chromate transport protein (Azospirillum sp. SherDot2)
MSDSPSPLPSFGAFCLYWLRLGLTSFGGPAGQIAMMQSELVDRRRWIDQTRFLHALNFCM
LLPGPEAQQLATYIGWRMYGGRGGLVAGGLFVLPGALVLLALSWIAAAHGDTGLVGALFD
GIKPAVVAIIAAAVWRLGRRTLKGPAAVALAGAAFLALAALHLPFPLVVGVAAVIGGVAA
RTGRHWFAHPHPAGDDGSDGGSAIDLTAEPAPKAGRLLTLLVLGLVLWAVPVGAVLLTFG
ADPWRGIAALFTKAAFITFGGAYAVLPYIAGQAVDSYGWLSPREMIDGLALAETTPGPLI
LVTQYVGFFAGWNRPGALSPALAGTLGAALTTYVTFLPCFLFIFAGAPYLERLIHNRLAA
GALAAIAAAVVGVILNLGVYLGMAVLLPDGQHTAGSLIWAWAIMLTALYALTRRGVAIHW
VVAGGAAAGLIQALAASSL