Protein Info for MPMX19_02226 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 918 transmembrane" amino acids 666 to 685 (20 residues), see Phobius details amino acids 697 to 717 (21 residues), see Phobius details PF00805: Pentapeptide" amino acids 755 to 791 (37 residues), 45 bits, see alignment (E = 9e-16) amino acids 789 to 826 (38 residues), 34.1 bits, see alignment (E = 2.3e-12) amino acids 804 to 841 (38 residues), 34.4 bits, see alignment (E = 1.9e-12) amino acids 829 to 868 (40 residues), 51.3 bits, see alignment (E = 1e-17) amino acids 864 to 902 (39 residues), 46.2 bits, see alignment (E = 4e-16) PF13599: Pentapeptide_4" amino acids 780 to 856 (77 residues), 27 bits, see alignment E=6.4e-10 amino acids 823 to 895 (73 residues), 36.6 bits, see alignment E=6.6e-13 amino acids 839 to 907 (69 residues), 35.9 bits, see alignment 1.1e-12

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (918 amino acids)

>MPMX19_02226 hypothetical protein (Azospirillum sp. SherDot2)
MVAVERASLARAFGKVAVDLADLKFASAIKGVIDATGAFKADPKSPPTAEEGAKLLLQRA
AYAAAIRTIQAEVRNAPVMVTEADPQEIEAAILGATADISLDLTELALTDPERWPGLETL
LTLFDWFMRACEVLDVNRLLIRRAFAAALPLALAGEWRNPEREKDYQALRAALEPTPFDL
AAQRSLQWNAYRDRLVKAIDAPLRALNPEKIRCSLNNLYIPLRAAIGDPEAPERTSGERR
KQPLVWLDDTLYGWVTQTDHGPSDRIRVLSGEPGAGKSSACMKLAARLAAEKWKVLLVPL
TRLNIAKGSLEELARYLVGDLGHDPFNSLSAAEPLVLILDGLDELAKAGQGATVLLSGFI
TDLGQRVSEWNREGPRVLLLLAGRPGATGAAVATGAIGRGDDARLHVLRYRIAVHDRYSY
EPEELVDLDQRWNWWDRFDPKGGMPEPLKRDDPHIDSLTEQPLLNWLLAQILTEEGPERA
ATISDVHDLYTRLFGHVLDRIHRRLPGDGSTEAIDPVRDRLEQMLEEVAVAAWHAGTNRA
VPLNDVEKRLADNRLSGELRLLSNNTDAALTTLLDSFFCRAHQGVEHRLVEFTHKSFGQF
LTARRVVRLLPEMPNSQEVRRNRTDAALKDWLELCGPAAMDWSTYVFLSAQVATEANRAP
LKVAQWWSAMSSLLVECLEVGMPLPDGGMRSRDSERLIRNAEIAMLCAVAAVSGALIEKP
NPIRIDPAILAETLHRLAGRVTDWSIARETFHIFDLSGADLRSVDLANANLTGANLTDAD
LRGANLTGANLAGADLRGADLTDAYLMDAYLTGAALIGADLLGADLLGADLRDATLTGAY
LPGANLMRVDLTNANLTGADLREADLTNANLTNADLTNANLTRADLTDANLTNANLTRAD
LQPEQLTPKQLTACYRTP