Protein Info for MPMX19_02072 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 694 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details transmembrane" amino acids 321 to 341 (21 residues), see Phobius details PF22673: MCP-like_PDC_1" amino acids 146 to 224 (79 residues), 34.7 bits, see alignment E=4.2e-12 PF02743: dCache_1" amino acids 152 to 269 (118 residues), 56.2 bits, see alignment E=7.6e-19 PF00672: HAMP" amino acids 347 to 393 (47 residues), 31 bits, see alignment 5.3e-11 PF00015: MCPsignal" amino acids 498 to 650 (153 residues), 99.5 bits, see alignment E=4.2e-32

Best Hits

KEGG orthology group: None (inferred from 89% identity to azl:AZL_024650)

Predicted SEED Role

"Methyl-accepting chemotaxis protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (694 amino acids)

>MPMX19_02072 hypothetical protein (Azospirillum sp. SherDot2)
MKARFRTKIIIGVAAVLAAGAAAVTAVSLTLSRDAGHKAAQTLAAEMADRHGARVAADLS
AALDAARAAAALVEVERSTGTPRRETVNRYLARVADANPLYAGVWVDMADDGFDGRDAAF
ADHDRSTEILGLPKTGRMSLLWLPGDKGVHADDSEGYPFSDVQEKEYYKSAAAARKPVLT
EPYLDDFTKRLMTSAAAPVIDGTAGGGRVIGVTGVDMALSGLTDLVRSVKPYGDGFAAVL
TGSGLYVAHPDDGRLSKTADDLPEAARRAVAEGRAFDGLVMLAGAPHYLRLAPVRFSGTE
GAWSFMVAAPQSSVMADANRLAVLIVLVSLGCVALGCVVAWKVGDGIARPVSAVTVAMDR
LAAGDLAVTVPGADRDDEAGGMARAVEVFKEGLVRAKELDRQQQADWHAKEVRVAALADL
QKSFEVRVGGLTGALASSAQQLESTARALTGIADQSLGRSEQVAASASAAADSVQTAAAA
TEELSASVQDIGRQVADSARIADAAVSDVKRADEAVTVLAESAERIGAVVELINSIAGQT
NLLALNATIEAARAGEAGKGFAVVASEVKGLANQTAKATEDIVAQIKGIRDATQEAVTAV
HGINETIAQVSRIASGIAAAVDQQAAATQEIARSVIRAADGAQEVSGGMGNIRAGAGETG
AAADQLLAAAAALAGQSKDLTREIDGFIAGVRKA