Protein Info for MPMX19_01973 in Azospirillum sp. SherDot2

Annotation: Beta-barrel assembly-enhancing protease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 423 PF01435: Peptidase_M48" amino acids 10 to 198 (189 residues), 100.5 bits, see alignment E=1.6e-32 PF13432: TPR_16" amino acids 239 to 278 (40 residues), 15.9 bits, see alignment 2.3e-06 amino acids 249 to 312 (64 residues), 29.9 bits, see alignment E=9e-11

Best Hits

KEGG orthology group: None (inferred from 92% identity to azl:AZL_023680)

Predicted SEED Role

"Putative Zn-dependent protease, contains TPR repeats"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (423 amino acids)

>MPMX19_01973 Beta-barrel assembly-enhancing protease (Azospirillum sp. SherDot2)
MQILSDAETDHIIRKMARPIFQAAGIDPDSVQILLINDPTVNAFVAGGQNIFIHTGLLLD
VDNADQLLGVIAHETGHISGGHLVRGAEAMDNAFLASLLGMGLGIAGGLASRNAGAGAAG
VMLGQHLAERNYLSFSRTQEASADQAGLSFLEQSGISAKGMETFLEKLGVNDPLMNDRDA
GYRLTHPLTRERIDAVKAFVARSRYSNAQLPSATEADLRRVQAKLFGYLDPRGALVRYKV
NDPSPAARYGRAYAYFRQGDVKQATPLVDGLIADEPKNPYLYEMKGDLMLQTGRAPDAVA
PYRKAVEMAGSDAGTIRVSLAHALLEQHDPRLADEALKNLQIASKGKAQSAFLWRLTAQA
WSMKKNDGMVAYATAEEALARGDMPMAKAQAERAERTLPAGSPGWLRAQDIRGQTGGADK
PER