Protein Info for MPMX19_01897 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 575 transmembrane" amino acids 45 to 66 (22 residues), see Phobius details amino acids 99 to 119 (21 residues), see Phobius details amino acids 125 to 143 (19 residues), see Phobius details amino acids 152 to 171 (20 residues), see Phobius details amino acids 177 to 194 (18 residues), see Phobius details amino acids 208 to 239 (32 residues), see Phobius details amino acids 258 to 278 (21 residues), see Phobius details amino acids 290 to 309 (20 residues), see Phobius details amino acids 328 to 347 (20 residues), see Phobius details amino acids 359 to 379 (21 residues), see Phobius details amino acids 389 to 409 (21 residues), see Phobius details amino acids 418 to 437 (20 residues), see Phobius details PF13231: PMT_2" amino acids 126 to 276 (151 residues), 35.6 bits, see alignment E=5.8e-13

Best Hits

KEGG orthology group: None (inferred from 93% identity to azl:AZL_022990)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (575 amino acids)

>MPMX19_01897 hypothetical protein (Azospirillum sp. SherDot2)
MSIESRLHTGDGEDAGSGARRPRPATATAAGRALPRGEAALWDGLSRALLLGVLILAALT
FLSYGISTDEEVQHIYGKKLLSYYLSGFQDRSAFHFKDLAYYGGLFDLVTAVIVPFSPFE
EYETRHLLCALVGVLGIAGTWRYTRLLAGPRAGFIAAALLSLSGVYYGAMFNNTKDVPFA
AGMVWTLYFATRILKQMPRPSRSAVLKFGLVLGMTLAIRVGAVLAGFYLAVAMALHFALV
TRQEGHRWALADARRAFLSLWPAIPVAYAIMAVFWPWVVQRPFRNPLEALRVVSHFPIDI
QTLFMGELVHSNDPPALYLPVYLAVKLPEAVVIGVGAAVIMAAVWLARGGWRRAGAFTVV
RYTPLVLAGFLPILLFVLMRPSVYNGIRHFLFLAPPFVVMAAIAADRLWTLSQRGGRALG
QGFAAAMTVVAVVYAWQLGAMHPNQYVYYNQFVGGVRGADGRFELDYWGNSLHEALQELI
EYVERENDGHAPPRQYTLTVCGNTLAVRFELPPWLRLVNGIEPDWRKADFFLAFTQVKRC
PSLLDGHPILEIAADDVPLSVVKDRRPPRAEIPTE