Protein Info for MPMX19_01870 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 189 transmembrane" amino acids 52 to 72 (21 residues), see Phobius details PF13302: Acetyltransf_3" amino acids 14 to 150 (137 residues), 121.2 bits, see alignment E=5.3e-39 PF00583: Acetyltransf_1" amino acids 69 to 149 (81 residues), 32.5 bits, see alignment E=9.5e-12

Best Hits

KEGG orthology group: None (inferred from 66% identity to azl:AZL_022730)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (189 amino acids)

>MPMX19_01870 hypothetical protein (Azospirillum sp. SherDot2)
MIVPRDEPMLETARLILRPTQADDFDGWAAMMANPEGTEFIGGVQSRPVAWRGFLSMAGA
WSIQGFAMFSVIEKETGRWVGRVGPWVPDGWPGPEIGWAIMPDCWGRGYAVESAAAAIDW
VFDHLGWTEVIHTIHPRNTASQAVARKLGAEVRGSTLLPEPVNPPEADVWHQTREEWRAR
RRIAKGVLL