Protein Info for MPMX19_01855 in Azospirillum sp. SherDot2

Annotation: putative intracellular septation protein A

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 188 transmembrane" amino acids 23 to 44 (22 residues), see Phobius details amino acids 52 to 72 (21 residues), see Phobius details amino acids 78 to 98 (21 residues), see Phobius details amino acids 122 to 142 (21 residues), see Phobius details amino acids 150 to 170 (21 residues), see Phobius details PF04279: IspA" amino acids 6 to 177 (172 residues), 192.7 bits, see alignment E=3.1e-61 TIGR00997: intracellular septation protein A" amino acids 7 to 179 (173 residues), 173.4 bits, see alignment E=2.6e-55

Best Hits

Swiss-Prot: 50% identical to YCIB_OLICO: Probable intracellular septation protein A (OCAR_4259) from Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5)

KEGG orthology group: K06190, intracellular septation protein (inferred from 94% identity to azl:AZL_022590)

Predicted SEED Role

"Probable intracellular septation protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (188 amino acids)

>MPMX19_01855 putative intracellular septation protein A (Azospirillum sp. SherDot2)
MNQFARLAIEAGPLAAFFVANSQAGIMTGTAVFMVAITIALAVSWRLERRIPIMPVVGAG
FVLLFGGLTLWLQDDLFIKIKPTLVNLLFAIVLFVAHMTRRNVMKRLLGTVLSLSDDGWR
TLGIRWAWFFLLLAVLNEVVWRNFATDMWVNFKVFGIMPLTLLFSAFQAPLIMRHQLPEE
PAESGPAA