Protein Info for MPMX19_01598 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 849 PF08446: PAS_2" amino acids 15 to 121 (107 residues), 57 bits, see alignment E=5.8e-19 PF01590: GAF" amino acids 150 to 306 (157 residues), 51.5 bits, see alignment E=3.2e-17 PF00360: PHY" amino acids 325 to 503 (179 residues), 184.7 bits, see alignment E=2.2e-58 PF07536: HWE_HK" amino acids 525 to 607 (83 residues), 78.5 bits, see alignment E=1.1e-25

Best Hits

KEGG orthology group: None (inferred from 85% identity to azl:AZL_019550)

Predicted SEED Role

"Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)" in subsystem Oxidative stress or Oxygen and light sensor PpaA-PpsR (EC 2.7.3.-)

Isozymes

Compare fitness of predicted isozymes for: 2.7.3.-

Use Curated BLAST to search for 2.7.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (849 amino acids)

>MPMX19_01598 hypothetical protein (Azospirillum sp. SherDot2)
MSGPVPTGSVDLTDCDREPIHQLGLIQPTGFLIAVTADWIVVHVSANIGRWLGVEPDDLL
GRPLAAFITGEALHTIRGRLQVAHINGSVERAFSVHLSDIAPVCDVAVHLSGSTIVIEAE
PSEGEGPQDSGSLLRSMIARVQNTRGFDGFCREAARQMRALTGFDRVMVYRFADDGSGEV
IAESAVHGIGSFLGQRYPASDIPQQARRLYERSWLRCISDVNAPPVPIVPTVDPMGQPLD
LSLSLLRSVSLIHVEYLRNMGVNASLSVSILRHGKLWGLFACHHRHARSLSFERRTTAEL
FGQMVSLLLEGREREQESQQEAQARRAHVRIMSMLADSESPLDSLVTFATELRALIDCDG
FACCIDGQLHMEGETPTREETLGVMRFLHRTPPSKIYLTDQLGAVHPPARDFTERACGLL
AIPVSRMPRDYLVFFRKELVRTVTWGGDPTKPAQYGPNGPRLTPRKSFEAWKETVHGRSK
PWTELDERNAESLRVTLLEVVLRLADIAGRTRKEATERQELLIAELNHRVRNILSLVRAL
VRQSESGAETVQQFAAIVAGRIEALARAHDQITADNWGPASLRALIVAEIGAYLSARSER
VRLTGPEVLLAPQAFSVFALVVHELTTNSAKYGALSDSSGWVEADWSIDEGGRLLIDWQE
NGGPPVRAPSRTGFGTTVIERSVPHDLQGEAEVTYALSGLRARFMIPARFVTIADSLPTG
SRRSMPVPAADFSIGGPVLLLEDNMIIAMATEDVLLSFNASRVNTAAGVRHALRLIDEDP
PVVGVLDINLGNETSVAVAERLRELGIPFVFATGYGESAAVPERFADVPVLKKPYGSDQV
VQVLASVMG