Protein Info for MPMX19_01505 in Azospirillum sp. SherDot2

Annotation: Rhomboid protease GlpG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 227 transmembrane" amino acids 25 to 43 (19 residues), see Phobius details amino acids 47 to 55 (9 residues), see Phobius details amino acids 74 to 97 (24 residues), see Phobius details amino acids 109 to 128 (20 residues), see Phobius details amino acids 134 to 152 (19 residues), see Phobius details amino acids 167 to 186 (20 residues), see Phobius details amino acids 198 to 217 (20 residues), see Phobius details PF01694: Rhomboid" amino acids 67 to 217 (151 residues), 108.7 bits, see alignment E=1.4e-35

Best Hits

KEGG orthology group: None (inferred from 80% identity to azl:AZL_018490)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (227 amino acids)

>MPMX19_01505 Rhomboid protease GlpG (Azospirillum sp. SherDot2)
MALAVDRHGRGGRGGPIVAMAAPPYANRTVILVCVLAFVLRLPPESFAFVPAYFFGTVEL
AGPLPTGALWRGLFGHVLVHGDLTHLLSNMAVLWLLGDVVEREVGRLRYLLLFLAGTVAA
ALTEGLLAADRMAPLIGASGAICALMGAFLWLRPRAGLLSRRLPRRLVQGAILVFALLNA
AMTLVPLNAESPMAEVGWGAHVGGLAAGLLLGALLILPRRSRANGGL