Protein Info for MPMX19_01460 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 239 transmembrane" amino acids 76 to 105 (30 residues), see Phobius details amino acids 125 to 143 (19 residues), see Phobius details amino acids 163 to 191 (29 residues), see Phobius details amino acids 204 to 227 (24 residues), see Phobius details PF06055: ExoD" amino acids 44 to 220 (177 residues), 163 bits, see alignment E=2.5e-52

Best Hits

KEGG orthology group: None (inferred from 91% identity to azl:AZL_018100)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (239 amino acids)

>MPMX19_01460 hypothetical protein (Azospirillum sp. SherDot2)
MNARRHIDGSGANGQAEMERAEMEHDGTIALPTVCDGEEEERTSDVLARFRANLPAGRVT
LGDLIRALGDRSLGTILLALALPTIAPVPLGVSCLFDLPIVLYTAQMAFGRRGAGLPDWL
LRRSIGTRLAARTLDAAMPRLVWIERMLKPRLHRLARIDEERWFGLLLFILTLTCIVPLP
LTGWLPGFALVLISLGLIERDGGAIGIGLGLTAAALVFLTLVASSLSYAGHQLLAATLN