Protein Info for MPMX19_01402 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1088 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF05170: AsmA" amino acids 2 to 169 (168 residues), 94.9 bits, see alignment E=5.9e-31 amino acids 766 to 1018 (253 residues), 37.3 bits, see alignment E=1.5e-13 PF13502: AsmA_2" amino acids 865 to 1068 (204 residues), 87.6 bits, see alignment E=9.7e-29

Best Hits

KEGG orthology group: None (inferred from 82% identity to azl:AZL_017320)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1088 amino acids)

>MPMX19_01402 hypothetical protein (Azospirillum sp. SherDot2)
MKKILIAALAGLAVSAGLLLAAPSLIDWNAYKGIIAERVSQATGRQVELRGDVGFTLLPS
PALTVRDARLANAAGAAEPDMVRLKKLDARVALGPLLGGRIQVESIALVEPTFVVEVLKD
GRINWDLSTAGTRGGDGLGAAEGLVSAVSFDQVLIDNGTIIYRDDRNGRTETVAGLSARI
AAGSLNGPFQIQGDFRLRGLSLHGEATAGRFTEGAAVPVRATLSMPHTDATLRFAGILTG
GGNSGNGSKVQGDLRAEGSDFAKLIDSPKSSWAPAALAQPFSLRSTVEAGTSLATFSGLE
AQLGDTRATGNATLRAGDPAKREEPRTELTLAVNRLDLDAWLAQGARSAGNTASAPSAAS
GTVDASGGGKAQSLSVVLPAGVEAKLDVAVDAIAYNRGVVRQGRIEASLSGGRLNIDRIS
ALLPGGSDFVAAGEVTTPGGQPTLDVRMEANADNLRALLDWAKLDLHGVPADRLRRASLS
GRLQGHADRFELSGLDFRFDSSRLSGAIAYVDRGRPAFGARLELDRLNLDGYLPADPTTA
QAPSQGSSQTAAQPANRAVGPRNGTANGSTGSAQTPQRMIGIADANLDLRVGQLTVGGLP
VQGLRLDATVASGALTVREAKVDDIAGLQARIDGQVASLIPLRGVNLALTADAKSLGGLP
SAVSWPRGLPVPERLGAVSAKARLAGDGERLAVEASAGMLGGTLEAGGVLLGLDRTPSAD
LKLRLTHPEMGRIAALFTDTGLARAYGPLDLYGEMSGSAASPALNNLQGLVAGVPLRGKL
VLDRKAERPAFQADIQTGDLDLDRLRNAPLVGDGAGRPASAAGDPAATPADPLSDLAWMQ
SLDGRLGLTSTSLTVGGQRIAQPALRATLSKGVATLEQLDGEWQGGQIGLSGRLATAAGQ
APKLDADLTVIKADTGNALSGLTGLSLSGGTVDLDVTLSGSGHGDALLRSLTGRGRAVAS
GGVLRGVDLAALRSRLAGVERTQEVLTAVAGALRGGETKLDRLDARFAIDNGVIRTEDAR
LTTAPADGTLAGTVSLAEEEVDLGLTLKVKTDGDLPPLTLRMTGPWAGPTQTLDLKALRD
RFNAAPAK