Protein Info for MPMX19_01326 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 342 signal peptide" amino acids 1 to 35 (35 residues), see Phobius details PF13365: Trypsin_2" amino acids 72 to 205 (134 residues), 55.5 bits, see alignment E=2.3e-18 PF00595: PDZ" amino acids 249 to 296 (48 residues), 28.1 bits, see alignment 4.2e-10 PF13180: PDZ_2" amino acids 250 to 323 (74 residues), 40.7 bits, see alignment E=4.9e-14 PF17820: PDZ_6" amino acids 264 to 301 (38 residues), 35.6 bits, see alignment 1.2e-12

Best Hits

KEGG orthology group: None (inferred from 92% identity to azl:AZL_013010)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (342 amino acids)

>MPMX19_01326 hypothetical protein (Azospirillum sp. SherDot2)
MRVVSTPVMPRLAAAVLFLIGLQLVVPGVVPAKAAESAQLDPERVVRSVVGITATVPADS
QSARTLGTDREGSGVVIDGSGLILTIGYTVMEASQIQVIAADGRSYPANMVAYDPVSGFG
LLRAEMGFSAPWLRLAGTGAVKEGDTLLALSGGGNRGATAVKVVGKREFAGYWEYLLDEA
LFTFPPIRAFNGAALVNREGRLVGIGSLLVAEAVEGRGLPGNMFVPVSALEPILADLLAY
GRRQEPARPWLGVTLREEMGRLLVEKVSPRSPAESAGLRPGDWIVGVGGQRFNGLADFYR
KLWGLGPAGIVVPLEVMRGSTLTPVPVTSADRVRFLRLNPTL