Protein Info for MPMX19_01283 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 211 PF12802: MarR_2" amino acids 84 to 141 (58 residues), 39 bits, see alignment E=1.1e-13 PF01047: MarR" amino acids 86 to 142 (57 residues), 40.3 bits, see alignment E=3.7e-14 PF13412: HTH_24" amino acids 93 to 132 (40 residues), 22.5 bits, see alignment 1e-08

Best Hits

KEGG orthology group: None (inferred from 86% identity to azl:AZL_013300)

Predicted SEED Role

"Transcriptional regulator, MarR family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (211 amino acids)

>MPMX19_01283 hypothetical protein (Azospirillum sp. SherDot2)
MQCGGVASTGGCLSIAANGLGWLWARNDGREIVGMEASVKGWEPERPGESEDAAGSADGA
LSFVVRDVNRAFARALQTRIARSGVSMGQWFFLRALWEEDGLTQRELSHRVGMMEPTTVT
AVNVMESQGLVQRVRNSHDRRKMNVFLTDKGRALRQTMMPSASEIAQIAIDGIAPEDLDL
TLEVLRRVGANLNAACAAARDGEDGGGRDER