Protein Info for MPMX19_01140 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 907 transmembrane" amino acids 6 to 28 (23 residues), see Phobius details amino acids 61 to 82 (22 residues), see Phobius details amino acids 620 to 641 (22 residues), see Phobius details amino acids 651 to 668 (18 residues), see Phobius details PF07584: BatA" amino acids 7 to 81 (75 residues), 72.9 bits, see alignment E=2.3e-24 TIGR02226: N-terminal double-transmembrane domain" amino acids 8 to 86 (79 residues), 71.5 bits, see alignment E=2.7e-24 PF13709: DUF4159" amino acids 688 to 887 (200 residues), 169.6 bits, see alignment E=6.5e-54

Best Hits

KEGG orthology group: None (inferred from 92% identity to azl:AZL_014740)

Predicted SEED Role

"FIG003603: membrane protein, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (907 amino acids)

>MPMX19_01140 hypothetical protein (Azospirillum sp. SherDot2)
MLGLGPIAFAAPWVLTALAALPVLWWLLRVTPPAPRAIQFPAIRLLRDLIAREETPARTP
WWLLLLRLIVAALIILALAGPLLNPRAALPGGGPLLLVVDNGWAAGRDWPTRKRTMDELI
AQADRQQRPVILLPTAPAADGQQIHASAVLPAPEARRLAQAMVPLPWPTDRAAALEALKA
VATQANGRGSIHAVWLSDGVGDKQAAALAAGLQRLGSADVLDDSAEHPPHLLLPPSSEGT
ALTARVVRADPSKPEPVTVRLAAADGRLLTRQTVSFEPGQKVREVRLDVPTELRNDAASL
RVEGDTTAGATVLLDERWRRRPVGLASGRAEGESQPLLSDLYYLERALSPYNEVRRGETL
DLLKRDLAVLILSDIGALTGTEVQDIEDWVKKGGVLVRFAGPRLAQHADTLVPERLRIGD
RALGGALSWSEPAKLQPFPPKSPFEGLTIPPDVQVNRQVLAEPALDLADRTWARLADGTP
LVTSQKRGDGWIVLVHTTASPDWSNLPLSGLFVDMLRRLVALSGGVTGTAATASLDPVEV
LDGTGRLVAPPPTAFPIPGNAAADVIGPRHPPGFYGTDDARRALNLSAAVTAIDPLPPMP
AGVGRDGYGGRGEVPLKPSLLSAALALLSIDLLIALALRGLLRPPALRRRAGGAAAGLLL
ALALSSAPQPARALDQDKAVKVTAETYLAYVQTGDSSVDDTARAGLEGLVSVLGLRTAVE
AAGAVGVDPEQDELAFYPLLYWPVSDRQKALSDQARQRVNEYMRSGGTILFDTRDQAPGG
GPAVLQRLVEGLDIPPLAPVPQDHVLRKSFYLLTDFPGRYAGGQLWIEAREGPANDGVSS
VVIGGNDWASAWAVGRNGQPMFAVIPGGERQREIAYRFGVNLVMYALTGNYKADQVHVPA
ILERLGQ