Protein Info for MPMX19_00809 in Azospirillum sp. SherDot2

Annotation: Autoinducer 2 sensor kinase/phosphatase LuxQ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 403 PF00512: HisKA" amino acids 27 to 92 (66 residues), 43.4 bits, see alignment E=4.3e-15 PF02518: HATPase_c" amino acids 137 to 250 (114 residues), 96.7 bits, see alignment E=1.8e-31 PF00072: Response_reg" amino acids 275 to 386 (112 residues), 51.9 bits, see alignment E=1.2e-17

Best Hits

KEGG orthology group: None (inferred from 94% identity to azl:AZL_010960)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (403 amino acids)

>MPMX19_00809 Autoinducer 2 sensor kinase/phosphatase LuxQ (Azospirillum sp. SherDot2)
MSLIHRLQSLEAERDAAREEAERANLAKSKFLAAASHDLRQPLQALFFLSAALARHVGDH
SGRDLLSRLDQGLDTMKGLLDGLLEVSRLEAGVVTPVLDTFEVSELTDALDAAYGEQATA
KGLVWRVESCEAVLRSDRGLLMQLLRNLVDNALRYTEAGAIRIRCRIDAGPDGDRLAIEV
QDTGIGIPPEHLDRIFEEFHQVGNPERDRLRGLGLGLAIVRRLSQLLDHPVEVRSVHGQG
SAFRVLVPLAPARFLAGRAGGPERPPSIDRPRLAVVVDDDAVVLLGLQTVLTEWGFRVVA
ADSADRAMDRLESLGRVPDIVIADYRLREGRVGTEVIRRVRARYGADVPALILTGETGAD
TLADASAHGVAILHKPVTPRQLQAEVDRQLRITRVNGIAQAAQ