Protein Info for MPMX19_00646 in Azospirillum sp. SherDot2

Annotation: Riboflavin transporter RfnT

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 409 transmembrane" amino acids 28 to 49 (22 residues), see Phobius details amino acids 59 to 79 (21 residues), see Phobius details amino acids 89 to 108 (20 residues), see Phobius details amino acids 114 to 138 (25 residues), see Phobius details amino acids 150 to 169 (20 residues), see Phobius details amino acids 181 to 202 (22 residues), see Phobius details amino acids 227 to 248 (22 residues), see Phobius details amino acids 266 to 285 (20 residues), see Phobius details amino acids 292 to 310 (19 residues), see Phobius details amino acids 316 to 340 (25 residues), see Phobius details amino acids 353 to 374 (22 residues), see Phobius details amino acids 381 to 402 (22 residues), see Phobius details PF07690: MFS_1" amino acids 29 to 258 (230 residues), 61.9 bits, see alignment E=2.7e-21 amino acids 231 to 402 (172 residues), 42.8 bits, see alignment E=1.7e-15

Best Hits

KEGG orthology group: None (inferred from 80% identity to mno:Mnod_7862)

Predicted SEED Role

"putative membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (409 amino acids)

>MPMX19_00646 Riboflavin transporter RfnT (Azospirillum sp. SherDot2)
MPQAEATARTEPASAASHAHELSNVARLVIAQALAGANAVVVYATGAIVGNTLAPSPALA
TLPISIFVVGMAICTLPAGSIARRFGRRAAFLGGTACGVLVGLLSSLALLLGSFWLFCAA
MIPGGAYAAVVLSFRFAAADCTGPERRPRAMSAVMAGGVVAGIVGPQLVTHTMNLWPPHL
FAATYLAQAAVAALSALVLLGVRLPKPTVSELGGGRPLAVILRQPRFITAVICGVVSYLL
MNFVMTAAPLAMRLCGLPQESSNLGLQWHVIAMYAPSFFTGRLIGRFGAPRIVAAGLALI
AASSAVGLAGQDIAHFWIGLILLGVGWNFGFLGASALVLDCHRPEEKTRVQSLNDFIVFG
TMACGSFASGSLLTSYGWDAVLSISFVPLALATAALIVTALYRSDRTAA