Protein Info for MPMX19_00626 in Azospirillum sp. SherDot2

Annotation: Energy-dependent translational throttle protein EttA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 558 TIGR03719: ATP-binding cassette protein, ChvD family" amino acids 5 to 555 (551 residues), 986.1 bits, see alignment E=4.8e-301 PF00005: ABC_tran" amino acids 24 to 193 (170 residues), 87.9 bits, see alignment E=2e-28 amino acids 342 to 475 (134 residues), 83.6 bits, see alignment E=4.2e-27 PF13304: AAA_21" amino acids 163 to 225 (63 residues), 27.8 bits, see alignment E=4.9e-10 PF12848: ABC_tran_Xtn" amino acids 232 to 299 (68 residues), 47.5 bits, see alignment E=3.1e-16

Best Hits

Swiss-Prot: 62% identical to ETTA_HAEIN: Energy-dependent translational throttle protein EttA (ettA) from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

KEGG orthology group: None (inferred from 99% identity to azl:AZL_009130)

Predicted SEED Role

"ABC transporter, ATP-binding protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (558 amino acids)

>MPMX19_00626 Energy-dependent translational throttle protein EttA (Azospirillum sp. SherDot2)
MASYQYVYVMKGLTKVYPGGKKVLDNVWLSFLPGVKIGVLGVNGSGKSTLMKIMAGLDKD
YSGEAWVAEGAKVGYLPQEPQLDPTKSVHENVMEALGETKALLDRFNEVSNLMADPDADF
DALLAEQGELQEKIDAADAWDIDRTVEIAMDALRCPPGDADVTKLSGGEKRRIALCKLLL
EKPDLLLLDEPTNHLDAESVAWLQKHLEDYKGTVVLVTHDRYFLDSVTGWILELDRGSGI
PWEGNYSSWLEQKQKRLEQEGRQEESRQKQLATELEWIRQSPRARQAKSKARITAYETLL
AESGKEQSGETRIVIPVPPRLGNVVIEAESIAKGFGDRLLIDGLSFRLPPGGIVGVIGPN
GAGKTTLFRMITGQDGPDAGTFRVGDTVKLGYVDQSRDSLDAKKTVWEEISDGLDLVELG
KKTMPSRAYVSSFNFRGPDQQKKVGQLSGGERNRVHLAKMLKSGANVLLLDEPTNDLDVD
TLRALEDALQSFAGCAVVISHDRWFLDRIATHILAFEGESHVEWFEGNFQDYEVDKKRRL
GADADQPHRIKYKPLVRS