Protein Info for MPMX19_00595 in Azospirillum sp. SherDot2

Annotation: Putative glutamine amidotransferase YafJ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 256 PF13230: GATase_4" amino acids 1 to 255 (255 residues), 383.8 bits, see alignment E=1.6e-119

Best Hits

Swiss-Prot: 65% identical to YAFJ_ECOLI: Putative glutamine amidotransferase YafJ (yafJ) from Escherichia coli (strain K12)

KEGG orthology group: K07008, glutamine amidotransferase (inferred from 95% identity to azl:AZL_007760)

Predicted SEED Role

"Predicted glutamine amidotransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (256 amino acids)

>MPMX19_00595 Putative glutamine amidotransferase YafJ (Azospirillum sp. SherDot2)
MCELLGMSANVPTDICFSFAGLMRRGGQTGPHRDGWGIAFYEGKGCRTFHDPAPSAESEI
ARLVSRYSIKSCTVISHIRRANRGRVSLENTHPFTRELWGRVWTFAHNGQLKGIKDRILT
FYEPVGSTDSEHAFCWLLDQIRMQYPEPPKTTTGLMKLIRHLAADLGTLGVFNMLLSDGR
YLWCHCATNLAWLTRKAPFGAATLLDADMSVDFSQETTPNDVVTVIATRPLTRDEAWTVM
QPGQMAVFRSGALVTR