Protein Info for MPMX19_00563 in Azospirillum sp. SherDot2

Annotation: Septum site-determining protein MinC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 255 TIGR01222: septum site-determining protein MinC" amino acids 14 to 249 (236 residues), 194.3 bits, see alignment E=1.2e-61 PF05209: MinC_N" amino acids 14 to 66 (53 residues), 39.3 bits, see alignment E=5.7e-14 PF03775: MinC_C" amino acids 149 to 248 (100 residues), 104 bits, see alignment E=3.8e-34

Best Hits

KEGG orthology group: K03610, septum site-determining protein MinC (inferred from 93% identity to azl:AZL_007450)

Predicted SEED Role

"Septum site-determining protein MinC" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (255 amino acids)

>MPMX19_00563 Septum site-determining protein MinC (Azospirillum sp. SherDot2)
MSSASQVAERDVPFQLRGNSFTMMVLKVFAPTSPNFFTQLNVKVRQAPNFFHNAPVVLDF
DDLPESIVFDLGAFVAQVQALHLLPVGFQGGPQPVREAAMAVGLTPMPSGRAAKLEEVVK
APDPRQPDQQSPIPAPQVLIEVVHRPTLVVTEPVRSGMRVYAEKTDLIVTSSVSPGAELL
ADGNIHVYGALRGRALAGFSGDTNARIFCHSLEAEVLSVAGNYRVSEDIGSDFYKKAVQV
FLRDGVLSMDLLKTA