Protein Info for MPMX19_00522 in Azospirillum sp. SherDot2

Annotation: putative zinc protease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 469 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details PF00675: Peptidase_M16" amino acids 61 to 206 (146 residues), 92.4 bits, see alignment E=2.8e-30 PF05193: Peptidase_M16_C" amino acids 215 to 396 (182 residues), 117.4 bits, see alignment E=7e-38

Best Hits

Swiss-Prot: 50% identical to Y4WA_SINFN: Uncharacterized zinc protease y4wA (NGR_a01040) from Sinorhizobium fredii (strain NBRC 101917 / NGR234)

KEGG orthology group: None (inferred from 94% identity to azl:AZL_007030)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (469 amino acids)

>MPMX19_00522 putative zinc protease (Azospirillum sp. SherDot2)
MPACIPARRLAAAGLLALTMTVAAPLAPIPLGTLLAPLPAHAAEKGVFFPESFTLSNGMQ
VVVIPNHRVPVVTHMVWYKVGAADEERGQSGIAHFLEHLMFKGTDAIQPGEFSRIIAKNG
GRDNAFTSYDYTAYYQNVARDRLEMVMRMESDRMSNLKLTDAVVYPERDVIIEERRQRIE
NEPADRIGEQINATLFVHHPYGTPVIGWPQEMSALTREMAERFYKTWYTPNNAILVVSGD
VTAAELKPLAERYYGAIAARPVPERKRVTEPPLTSSRQVVLRDDEVRQPSVRRIWTAPSY
RIDQTGQAYALQVLAEIMSGGTTSRLYRSLVVDQKLATSAWLGYGPTAWDMATLSVGASP
AAGVPMDKLESALWAEVDKLLKSGVTEEEVATARKRMLASAAYARDSLTGPAQTLGAALA
TGQSIDDVENWPVRIDAVTADQVNAAARAVLSQTNHVTGLLLPPTGKDS