Protein Info for MPMX19_00321 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 PF00805: Pentapeptide" amino acids 40 to 75 (36 residues), 23.9 bits, see alignment 3.6e-09 amino acids 66 to 105 (40 residues), 38.9 bits, see alignment 7.5e-14 amino acids 76 to 114 (39 residues), 41.9 bits, see alignment 8.9e-15 amino acids 91 to 125 (35 residues), 35.1 bits, see alignment 1.2e-12 amino acids 157 to 193 (37 residues), 28.3 bits, see alignment 1.6e-10 amino acids 186 to 223 (38 residues), 52.7 bits, see alignment 3.6e-18 amino acids 288 to 323 (36 residues), 18.7 bits, see alignment 1.5e-07 amino acids 300 to 336 (37 residues), 22.6 bits, see alignment 9.5e-09 amino acids 315 to 351 (37 residues), 39.6 bits, see alignment 4.6e-14 amino acids 333 to 365 (33 residues), 40.7 bits, see alignment (E = 2.1e-14) amino acids 379 to 414 (36 residues), 35.3 bits, see alignment 1e-12 amino acids 410 to 444 (35 residues), 38.2 bits, see alignment 1.2e-13 PF13599: Pentapeptide_4" amino acids 159 to 219 (61 residues), 27.4 bits, see alignment E=5e-10

Best Hits

KEGG orthology group: None (inferred from 95% identity to azl:AZL_005140)

Predicted SEED Role

"pentapeptide repeat protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (450 amino acids)

>MPMX19_00321 hypothetical protein (Azospirillum sp. SherDot2)
MSSAQGFGSNSPRTKLTQSQLNAILLRHQAFRKSQPGGVRANLKMRDLSHLDLSGIDLSD
ADLSGAKLFSARLTGANLANANLYAADLRLANLEKADLRRADLRGACLRGAVLSEATLVE
VDLRDGTLLHYDSSGEMYAHEYEDSVLTSELTAATIRGADLSRAKIANAFVMQTDLTDAV
LRGTKFMRANLTGSNLTGCDLTDADLTEANLSGARLSGAVMTGCAINRTNFSGATLIGAI
LDAAQMRSPNLQAAVLAKTLENPEDDLREMLMEHLSWIDSGGKAGKRADLSALDLSGRKL
DGINLSAAILQCIALRGANLSGASMAIADMSLADLRKADLSKADLRGVNFERATLTGANL
TGAQLGPVHIQTMSGHVWRANLQRARLGMALLCKADLRKANLSGANLAGADLTGANLSEA
DLTGADLTGAVLDGATMDQAIVEEAIGLAS