Protein Info for MPMX19_00219 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 305 transmembrane" amino acids 19 to 39 (21 residues), see Phobius details amino acids 48 to 67 (20 residues), see Phobius details amino acids 80 to 100 (21 residues), see Phobius details amino acids 106 to 128 (23 residues), see Phobius details amino acids 134 to 153 (20 residues), see Phobius details amino acids 164 to 184 (21 residues), see Phobius details amino acids 193 to 214 (22 residues), see Phobius details amino acids 226 to 247 (22 residues), see Phobius details amino acids 259 to 278 (20 residues), see Phobius details amino acids 284 to 301 (18 residues), see Phobius details PF00892: EamA" amino acids 18 to 150 (133 residues), 86.3 bits, see alignment E=1.1e-28 amino acids 166 to 301 (136 residues), 79.2 bits, see alignment E=1.7e-26

Best Hits

KEGG orthology group: None (inferred from 88% identity to azl:AZL_003480)

Predicted SEED Role

"Permease of the drug/metabolite transporter (DMT) superfamily" in subsystem Queuosine-Archaeosine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (305 amino acids)

>MPMX19_00219 hypothetical protein (Azospirillum sp. SherDot2)
MPADRTASVKGSRLADQAWLLMMLPPLFWAGNAVLGRAVAGSVPPIGLAFWRWFLGMLVV
LPFAWPHLRHDITPILARWKSVLLLGTLGIGIYNTFQYIALNSTTALNAVMLQSSMPVMI
VLMSLVLFRDRIGAMQGVGIAVSLVGAMTLISHGDPGTLLGLELNAGDVWMLAAVVIYAA
YTTLLRRRPAIHGLSFVVVTFAIGAVELLPFYVWESVSGHPVQASGITLLAVGYTVLFPS
IAAYLCFNRAVELLGPNTAGLAIHLVPVFGSLLAILFLGEQPHLYHGIGIALIAAGILLA
TRRRA