Protein Info for MPMX19_00029 in Azospirillum sp. SherDot2

Annotation: Phosphoglycolate phosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 292 transmembrane" amino acids 173 to 190 (18 residues), see Phobius details TIGR01459: HAD hydrolase, TIGR01459 family" amino acids 10 to 250 (241 residues), 183.7 bits, see alignment E=4e-58 TIGR01460: HAD hydrolase, family IIA" amino acids 20 to 252 (233 residues), 127.7 bits, see alignment E=6.3e-41 PF13344: Hydrolase_6" amino acids 20 to 126 (107 residues), 72.7 bits, see alignment E=4.6e-24 PF00702: Hydrolase" amino acids 196 to 243 (48 residues), 28.1 bits, see alignment 5.2e-10 PF13419: HAD_2" amino acids 197 to 249 (53 residues), 25.2 bits, see alignment 3.3e-09 PF13242: Hydrolase_like" amino acids 203 to 258 (56 residues), 50.9 bits, see alignment E=2.4e-17

Best Hits

KEGG orthology group: None (inferred from 94% identity to azl:AZL_026470)

Predicted SEED Role

"HAD superfamily protein involved in N-acetyl-glucosamine catabolism"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (292 amino acids)

>MPMX19_00029 Phosphoglycolate phosphatase (Azospirillum sp. SherDot2)
MADIRQISGIAEVIDRYDGFILDLWGVLHDGEQPYPGVPDCLDSMRAAGKTICLLSNAPR
RTTGVIEKLDGMGLGRERYHHVMTSGEATYEALRDRDDPWHATLGRRLYHIGPERDIDVF
SGLGYQVAATPEDADFVVNTGIVTFGETVADYQPQLDACLAAGLPMICANPDLVVMVGPM
LVICAGTLAARYEEMGGDVRQHGKPHAPVYERCFKLLGIADKSRILAVGDSLRTDVAGAN
AAGIDVALVTAGIHQEELGGAAWGASVDPVNLRALADASGHMPTYAVPSLRW