Protein Info for MPMX19_00015 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 257 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details transmembrane" amino acids 103 to 122 (20 residues), see Phobius details TIGR03373: type VI secretion-associated protein, BMA_A0400 family" amino acids 50 to 182 (133 residues), 128.6 bits, see alignment E=9.1e-42 PF09867: TagF_N" amino acids 50 to 182 (133 residues), 134.7 bits, see alignment E=1.1e-43

Best Hits

KEGG orthology group: K11890, type VI secretion system protein ImpM (inferred from 88% identity to azl:AZL_026570)

Predicted SEED Role

"Protein phosphatase ImpM"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (257 amino acids)

>MPMX19_00015 hypothetical protein (Azospirillum sp. SherDot2)
MTGGFATPRGMLAAAGAALLRAPGFGGGFGGGLGGGGRGGLAAGADPVVGFHGKVPARGD
FIGHGLPSAVLGPWDRWLSAALGEAGRRLGAEWEPLFAQAPVWRFALSAGLCGATPLVGV
WMPSADRVGRLYPFTIAAGLPAGFDIADAPAACGAWLSRAESLAADACRAGADVEGLPAR
LAILGRPEPERVSPATRALLDRLSGPLRADASLWWTRGAGRIAPSLLSCPGLPAGPRLTA
FLDGAWARWGWENADEG