Protein Info for MPMX19_00011 in Azospirillum sp. SherDot2

Annotation: Adaptive-response sensory-kinase SasA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 494 transmembrane" amino acids 37 to 61 (25 residues), see Phobius details amino acids 208 to 230 (23 residues), see Phobius details PF00672: HAMP" amino acids 229 to 279 (51 residues), 33.2 bits, see alignment 7.8e-12 PF00512: HisKA" amino acids 285 to 341 (57 residues), 35.1 bits, see alignment 1.7e-12 PF02518: HATPase_c" amino acids 383 to 494 (112 residues), 88.2 bits, see alignment E=7.5e-29

Best Hits

KEGG orthology group: None (inferred from 87% identity to azl:AZL_026610)

Predicted SEED Role

"sensor histidine kinase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (494 amino acids)

>MPMX19_00011 Adaptive-response sensory-kinase SasA (Azospirillum sp. SherDot2)
MTAQPETAKSQPETAKSRLARRRGAFRRLPFRFPDSLAARIALTVVLALLLTQAISALVY
LTDRSEGPPIHGPNVLIQRITAIVQLVESTPPQGRERVVRAIDDPVLRVELSPDRPPPLS
PGAYAGGRFEGLKRRLSEQLDTADRNILIEVQRPPRGEGRDDPRPPPPFMAGDEPRHWGP
HVRLSVRLGDGSWLSFTGGEPLPGPFGIVRFVLWMGAIVAVILLVSLLAARRVTAPLAGF
AAAAERLSVDGQADPLPEEGPRELRAATRAFNRMQARLARFVADRTQMLAAIGHDLRTPI
TRLRLRAELVDDPEMQRRMLADLDEMEAMISATLAFARDDAQREPRGRFDLADLLQSLCD
DRVDAGHRALYDGPAHMVAEGRTVALRRALANLMDNAIKYGGGFTVRLETGPDGAAHAAN
ALIHIDDDGPGIPEAEFEKVFAPFYRLERSRSRDTGGVGLGLSTARSIIRGHGGDVTLSN
RSGGGLRATVTLPL