Protein Info for MIT1002_03567 in Alteromonas macleodii MIT1002

Annotation: mycofactocin system glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 598 PF00535: Glycos_transf_2" amino acids 335 to 513 (179 residues), 40.9 bits, see alignment E=2.2e-14 PF13641: Glyco_tranf_2_3" amino acids 410 to 564 (155 residues), 30.7 bits, see alignment E=2.9e-11

Best Hits

Predicted SEED Role

"Glycosyl transferase, group 2 family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (598 amino acids)

>MIT1002_03567 mycofactocin system glycosyltransferase (Alteromonas macleodii MIT1002)
MENQVLNVFKKNKGEITPKLIKSTIESEFNAEFYAQKYTFLTTDDHLTHFVVEGWKEGLD
PCEWFSTSKYMQAYPDVVASGVNPFFHYLYYGRNEGRNEGLVGVGGDGSLRALVNASNQS
DDEYHNSRYFKEASDILGSELAFTSQQFERFANWTKVVPKANGPHPHVKAFLETAKATGS
GKEAIALGWVIRKPDSFVWFETNQGEVLPMRSAFFQYRQDVYDAFEDEMTDALPYTGFVQ
ALTACNPDTILRIYALSSQGAHEVAQCNVERVDSAPKKLAEFLASINTPLSELPKRISKI
DEPLISSAIAQKNKAISAMPHEVYSFGECSSPEASIIIPLYGRVDFVEAQMQCFSKDLFI
QNHCELIYVIDDPFLVEPFKKLSNDIYALYGIPFKVVWGGLNRGFSGANNLGVEYATAHY
LLFLNSDAFPKNPGWVEQLTDALNSNSDYGVVSPRLLFADGSIQHAGMEFVYRNELSIWT
NHHPNMGIDPSLDPHTEATMVPAVTGACMLMTRALFDSVGGWDNGYLIGDFEDSDLCFKI
REQGKHCIYVPTVELTHLERQSFNLTGAPDFRTKVVIYNATRHQNKWSSLLQQSVSKG