Protein Info for MIT1002_03518 in Alteromonas macleodii MIT1002

Annotation: sodium-dependent inorganic phosphate (Pi) transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 384 transmembrane" amino acids 23 to 44 (22 residues), see Phobius details amino acids 55 to 76 (22 residues), see Phobius details amino acids 82 to 104 (23 residues), see Phobius details amino acids 140 to 162 (23 residues), see Phobius details amino acids 205 to 227 (23 residues), see Phobius details amino acids 289 to 312 (24 residues), see Phobius details amino acids 317 to 342 (26 residues), see Phobius details amino acids 362 to 382 (21 residues), see Phobius details PF02690: Na_Pi_cotrans" amino acids 33 to 147 (115 residues), 66.2 bits, see alignment E=1.6e-22 amino acids 218 to 336 (119 residues), 59.3 bits, see alignment E=2.2e-20

Best Hits

KEGG orthology group: K14683, solute carrier family 34 (sodium-dependent phosphate cotransporter) (inferred from 94% identity to amc:MADE_00709)

Predicted SEED Role

"Sodium-dependent phosphate transporter" in subsystem Phosphate metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (384 amino acids)

>MIT1002_03518 sodium-dependent inorganic phosphate (Pi) transporter (Alteromonas macleodii MIT1002)
MSMIDPQLAKNSALEKAHNWRKWLLLALLVYVMLLAVSMIGSGFKFATGDHAKSLFSFAS
NPVMGLIIGMVCTALIQSSSTVTSIIVGMVAGGLPITIAIPMMMGANIGTSITNTLVSLG
HVAKKDEFQRAFNAATIHDFFNVLSVLIFLPLEMAFGILEFLSAQLVALLHTGEAIGVSG
VNPIKAMTQPVTDLVTQAFSFLPSIYPGVAKIILGIGLIMFSITYMGKIMKSLMVGKAKA
LLHTSIGKGPLSGITSGAVMTVLVQSSSTTTSLMVPLVGSGILKAKDIYPFTLGANIGTC
ITALIAALGVVGVNSGFALQIALVHLIYNVLGVTLIYGLPLLRNIPLNLSYQLSVIAAER
KMYGAAYIGGLFFIMPLGIIFTTM