Protein Info for MIT1002_03169 in Alteromonas macleodii MIT1002

Annotation: Azurin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 149 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF00127: Copper-bind" amino acids 22 to 147 (126 residues), 85 bits, see alignment E=2e-28 TIGR02695: azurin" amino acids 23 to 147 (125 residues), 197.7 bits, see alignment E=3.5e-63

Best Hits

Swiss-Prot: 53% identical to AZUR_PSEAE: Azurin (azu) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: None (inferred from 86% identity to amc:MADE_01601)

Predicted SEED Role

"Azurin"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (149 amino acids)

>MIT1002_03169 Azurin (Alteromonas macleodii MIT1002)
MIKKLLGGTALFLMASGAFANECEVTVESNDAMQFNTSNVVIPASCSEFTVTLKHTGQLP
KQAMGHNWVMTTKANGQAVATDGMSAGLDNNYVKPDDERVIGATDIIGGGEQTSTTFSVE
GLSKDEEYMFFCSFPGHIGIMKGTVTLSS