Protein Info for MIT1002_02638 in Alteromonas macleodii MIT1002

Annotation: Imidazole glycerol phosphate synthase subunit HisF

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR00735: imidazoleglycerol phosphate synthase, cyclase subunit
  • amino acids 1 to 256 (256 residues), 353.8 bits, E=2.3e-110
• PF00977: His_biosynth
  • amino acids 5 to 239 (235 residues), 244 bits, E=1.4e-76
• PF01207: Dus
  • amino acids 32 to 118 (87 residues), 24.5 bits, E=1.4e-09

Best Hits

Swiss-Prot: 99% identical to HIS6_ALTMD: Imidazole glycerol phosphate synthase subunit HisF (hisF) from Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype)

KEGG orthology group: K02500, cyclase [EC: 4.1.3.-] (inferred from 99% identity to amc:MADE_01112)

MetaCyc: 74% identical to imidazole glycerol phosphate synthase subunit HisF (Escherichia coli K-12 substr. MG1655)
GLUTAMIDOTRANS-RXN [EC: 4.3.2.10]

Predicted SEED Role

"Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)" in subsystem Histidine Biosynthesis (EC 4.1.3.-)

MetaCyc Pathways

• superpathway of histidine, purine, and pyrimidine biosynthesis (43/46 steps found)
• L-histidine biosynthesis (10/10 steps found)
• L-glutamate and L-glutamine biosynthesis (6/7 steps found)
• ammonia assimilation cycle III (3/3 steps found)
• L-glutamate biosynthesis I (2/2 steps found)
• L-glutamine degradation I (1/1 steps found)
• L-citrulline biosynthesis (6/8 steps found)
• L-asparagine biosynthesis III (tRNA-dependent) (3/4 steps found)
• glutaminyl-tRNA^gln biosynthesis via transamidation (3/4 steps found)
• superpathway of L-citrulline metabolism (8/12 steps found)

KEGG Metabolic Maps

• Biosynthesis of alkaloids derived from histidine and purine
• Biosynthesis of plant hormones
• Pyruvate metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.1.3.- or 4.3.2.10

Protein Sequence (270 amino acids)

>MIT1002_02638 Imidazole glycerol phosphate synthase subunit HisF (Alteromonas macleodii MIT1002)
MLAKRIIPCLDVRDGKVVKGVQFRNHEIIGDIVPLAEQYAKAGADELVFYDITASSDARV
VDKSWVSRIAQVIDIPFCVAGGIKSIEDAGRILEMGADKISINSPALNNPDLINQLHDVY
GQQCVVIGIDSFYNEATDQYEVYKFTGDEARTQKSQWQTIDWIKEVQSRGAGEIVLNCMN
QDGVREGYDVKQLKAVRDVCEVPLIASGGAGEIAHFTDVFQQADVDGALAASVFHKGIIN
IDELKAELTSNGVAMRKRHGLTAQAEGVNP