Protein Info for MIT1002_02407 in Alteromonas macleodii MIT1002

Annotation: Glucose-6-phosphate 1-dehydrogenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 497 TIGR00871: glucose-6-phosphate dehydrogenase" amino acids 9 to 490 (482 residues), 617.8 bits, see alignment E=6.9e-190 PF00479: G6PD_N" amino acids 13 to 185 (173 residues), 185 bits, see alignment E=2.3e-58 PF02781: G6PD_C" amino acids 188 to 488 (301 residues), 417.1 bits, see alignment E=3.5e-129

Best Hits

Swiss-Prot: 61% identical to G6PD_DICD3: Glucose-6-phosphate 1-dehydrogenase (zwf) from Dickeya dadantii (strain 3937)

KEGG orthology group: K00036, glucose-6-phosphate 1-dehydrogenase [EC: 1.1.1.49] (inferred from 98% identity to amc:MADE_01244)

MetaCyc: 60% identical to NADP+-dependent glucose-6-phosphate dehydrogenase (Escherichia coli K-12 substr. MG1655)
Glucose-6-phosphate dehydrogenase. [EC: 1.1.1.49]

Predicted SEED Role

"Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)" in subsystem Entner-Doudoroff Pathway or Pentose phosphate pathway (EC 1.1.1.49)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.1.1.49

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (497 amino acids)

>MIT1002_02407 Glucose-6-phosphate 1-dehydrogenase (Alteromonas macleodii MIT1002)
MVLDNSYEPCDFVLFGTLGDLSRRKLLPSLYQLEKANLMHPDTTIVGVARQEMELDAYIE
EVHANLIKFGEKNLCEATWEKMKARLHYACVDMKDVESYCVLDDHVDSSRTMVCYLATPP
AIYGDICRGLHSCKIIDSSVRVVLEKPIGHDLASSKVINEQVAEYFDEKQIYRIDHYLGK
ETVLNLVSLRFANSIFATNWDHNCIDHVQISVAESVGIEGRWGYFDDAGQMRDMVQNHLL
QILSLVAMEPPTTLDADSIRDEKLKVLKALRPINSFNINESTVRGQYTSGFVKGEEVPGY
LEEEGANTQSKTETFVAIKAEIDNWRWAGVPFYLRTGKRMPTKVSEVVIYFKRQPHNLFG
DSFKNLPPNKLVIRLQPDEGVEITVMNKVPGLTSSGSMDLQKSKLNLSFSEAFADERIPD
AYEKLLLEVMLGNQALFVRRDEIEQAWTWVDSILEAWKQSSEPPEPYQAGTWGPVDSIGL
LARENRSWYESKTGKKK