Protein Info for MIT1002_02094 in Alteromonas macleodii MIT1002
Annotation: Metapyrocatechase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 78% identical to XYLE_PSEAI: Metapyrocatechase (bztE) from Pseudomonas aeruginosa
KEGG orthology group: K00446, catechol 2,3-dioxygenase [EC: 1.13.11.2] (inferred from 71% identity to avn:Avin_08720)MetaCyc: 78% identical to subunit of catechol 2,3-dioxygenase (Pseudomonas putida mt-2)
Catechol 2,3-dioxygenase. [EC: 1.13.11.2]
Predicted SEED Role
"Catechol 2,3-dioxygenase (EC 1.13.11.2)" in subsystem Central meta-cleavage pathway of aromatic compound degradation (EC 1.13.11.2)
MetaCyc Pathways
- catechol degradation II (meta-cleavage pathway) (7/7 steps found)
- catechol degradation I (meta-cleavage pathway) (5/5 steps found)
- catechol degradation to 2-hydroxypentadienoate II (4/4 steps found)
- meta cleavage pathway of aromatic compounds (8/10 steps found)
- catechol degradation to 2-hydroxypentadienoate I (2/2 steps found)
- toluene degradation I (aerobic) (via o-cresol) (5/7 steps found)
- toluene degradation V (aerobic) (via toluene-cis-diol) (5/7 steps found)
- 2-nitrotoluene degradation (2/3 steps found)
- toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol) (2/4 steps found)
- toluene degradation to 2-hydroxypentadienoate I (via o-cresol) (2/4 steps found)
- toluene degradation II (aerobic) (via 4-methylcatechol) (3/6 steps found)
- toluene degradation IV (aerobic) (via catechol) (8/13 steps found)
- naphthalene degradation to acetyl-CoA (5/12 steps found)
- mandelate degradation to acetyl-CoA (6/18 steps found)
- superpathway of aerobic toluene degradation (11/30 steps found)
- superpathway of aromatic compound degradation via 3-oxoadipate (9/35 steps found)
- superpathway of aromatic compound degradation via 2-hydroxypentadienoate (14/42 steps found)
KEGG Metabolic Maps
- 1,4-Dichlorobenzene degradation
- Benzoate degradation via hydroxylation
- Carbazole degradation
- Styrene degradation
- Toluene and xylene degradation
Isozymes
No predicted isozymesUse Curated BLAST to search for 1.13.11.2
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (307 amino acids)
>MIT1002_02094 Metapyrocatechase (Alteromonas macleodii MIT1002) MKKGIMRPGHVQIRVLDMEAALKHYVDLLGLIETDRDESGRVYLKAWTEVDKFSVVLREA EEAGCDFMAFKVVDEEALLQLEKDLVKFGCDITHLEAGELKDCGRRVQFTSASGHCFELY TDKKYTGKWGLNEVNPEAWPRNLTGMKAVRFDHCLFYGDALAETYDLFVNVLGFYLAEQV LDPDGNRIAQFLSLSTKAHDIAFIMHEEKGKFHHASFYLETWEDILRAADLISMEDVPID IGPTRHGLTHGKTIYFFDPSGNRTEVFAGGDYNYPDHKPVTWLSDDLGKAIFYHDRVLNE RFLSVLT