Protein Info for MIT1002_02030 in Alteromonas macleodii MIT1002

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 686 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details PF06980: DUF1302" amino acids 13 to 685 (673 residues), 512.9 bits, see alignment E=7e-158

Best Hits

KEGG orthology group: None (inferred from 89% identity to alt:ambt_08050)

Predicted SEED Role

"FIG067310: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (686 amino acids)

>MIT1002_02030 hypothetical protein (Alteromonas macleodii MIT1002)
MKNGPSAFKISPVAAGVLSLLGAAAVPAHAANWQVGDVNISLDSTFTLATSIRTEARDYD
LIGNSNHPQFDWSGYHAAFNPLYPSGDVWGLADGGYSTNGDLGNLAHDPGDAFATQISGT
HELDINFGDYGFFARGFWFYDFEQMDGDRPYSNPITGNQYDLCQDPEAEDLLCTDVRLYD
AFFYGDWWIGDKPLTLRVGRQVISWGESTFIQHGINTTNPVDVTRARAPGAELKEVFLPV
GMVYASLGLTDTVSISGYYQYEWERSWLPVSGSYFAGNDFAGEGGQRQNVQLGFSGNPDI
DLDHLLTALNGYGDLLRSGANPEDISQAYLAYPTKVAIRGFSDAAHNDADDQGQYGLRLT
WFAENLNETEFSFYHINYHSQRPLISGKTSDFTAEGIGADLAFLASNTVTRDNITELGAF
TQSEFFYPEDIKLYGMSFNTNIGTTALAGEFAYRVDEPLQIDDVELLYMGMPEQLANAGL
RPDLEGISQLNNIGRAVGPGETAEGFLFSDTWQMQFTASHVFGPKFGSDNFVLLGEVGYV
NVVDMPDPDVIRLNAPGTARTPSLEPINGNSREGLHQGLSDGPETNPFATDDAWGYRLLA
VADYNSIFAGMNLRVRGTFSHDVEGTTPDPLFLFTEDVKSAALSFTFDYLSKWSATASYS
AFWGGIGTTNALSDRDFISFNIKYAI