Protein Info for MIT1002_01679 in Alteromonas macleodii MIT1002

Annotation: putative manganese-dependent inorganic pyrophosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 139 PF00571: CBS" amino acids 6 to 58 (53 residues), 35.8 bits, see alignment E=4.2e-13 amino acids 73 to 127 (55 residues), 44.7 bits, see alignment E=6.9e-16

Best Hits

KEGG orthology group: None (inferred from 96% identity to amc:MADE_02402)

Predicted SEED Role

"CBS domain protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (139 amino acids)

>MIT1002_01679 putative manganese-dependent inorganic pyrophosphatase (Alteromonas macleodii MIT1002)
MESLQVSDYMNTHPVKLNVDMPVAQAVEVLLASGQSGGPVLDSKGRVVGFLSEQDCIAQM
IASSYYREQICRVGEIMKTPVISIKPYMSVIELAQLLLKEKPRVYPIVDDDGVLLGSINR
TAVLRAIDVQLNDGYQRAG