Protein Info for MIT1002_01363 in Alteromonas macleodii MIT1002

Annotation: ribosomal-protein-alanine acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 163 PF00583: Acetyltransf_1" amino acids 40 to 138 (99 residues), 74.2 bits, see alignment E=1.6e-24 PF13673: Acetyltransf_10" amino acids 46 to 138 (93 residues), 33.4 bits, see alignment E=6e-12 PF13508: Acetyltransf_7" amino acids 53 to 138 (86 residues), 47.2 bits, see alignment E=3.6e-16

Best Hits

Swiss-Prot: 40% identical to SAT2_PIG: Diamine acetyltransferase 2 (SAT2) from Sus scrofa

KEGG orthology group: None (inferred from 94% identity to amc:MADE_02661)

Predicted SEED Role

"Histone acetyltransferase HPA2 and related acetyltransferases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (163 amino acids)

>MIT1002_01363 ribosomal-protein-alanine acetyltransferase (Alteromonas macleodii MIT1002)
MSNAISIRPATPEDISQIRQFILELAIYEKAEHEVEADEEALLKTLFGEGATAHCVMCES
DDAPIGFAVYFFNYSTWQGRNGLYLEDLYVSPKSRGLGAGKALLQHLAKTAVENDCGRFE
WSVLDWNKPAIDFYESLGAKPKSEWLGYRMDGQTLIDFAKQGE