Protein Info for MCAODC_26805 in Escherichia coli ECRC101

Name: fepD
Annotation: ferrienterobactin ABC transporter permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 334 transmembrane" amino acids 6 to 31 (26 residues), see Phobius details amino acids 64 to 83 (20 residues), see Phobius details amino acids 94 to 114 (21 residues), see Phobius details amino acids 121 to 139 (19 residues), see Phobius details amino acids 151 to 173 (23 residues), see Phobius details amino acids 194 to 216 (23 residues), see Phobius details amino acids 239 to 264 (26 residues), see Phobius details amino acids 282 to 304 (23 residues), see Phobius details amino acids 309 to 326 (18 residues), see Phobius details PF01032: FecCD" amino acids 19 to 328 (310 residues), 309.7 bits, see alignment E=9.8e-97

Best Hits

Swiss-Prot: 100% identical to FEPD_ECOLI: Ferric enterobactin transport system permease protein FepD (fepD) from Escherichia coli (strain K12)

KEGG orthology group: K02015, iron complex transport system permease protein (inferred from 100% identity to eco:b0590)

MetaCyc: 100% identical to ferric enterobactin ABC transporter membrane subunit FebD (Escherichia coli K-12 substr. MG1655)
ABC-10-RXN [EC: 7.2.2.17]

Predicted SEED Role

No annotation

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.2.2.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (334 amino acids)

>MCAODC_26805 ferrienterobactin ABC transporter permease (Escherichia coli ECRC101)
MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAFSGTCQSADCTIVLDAR
LPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQ
LAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLTSGIALLNPDVYDQL
RFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALNSLSLGSDTATALGSRVARTQLI
GLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIG
RVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA