Protein Info for MCAODC_11325 in Escherichia coli ECRC101

Name: ygaY
Annotation: Putative uncharacterized transporter YgaY

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 394 transmembrane" amino acids 12 to 29 (18 residues), see Phobius details amino acids 45 to 67 (23 residues), see Phobius details amino acids 78 to 96 (19 residues), see Phobius details amino acids 101 to 124 (24 residues), see Phobius details amino acids 135 to 158 (24 residues), see Phobius details amino acids 165 to 184 (20 residues), see Phobius details amino acids 217 to 239 (23 residues), see Phobius details amino acids 248 to 267 (20 residues), see Phobius details amino acids 279 to 296 (18 residues), see Phobius details amino acids 302 to 321 (20 residues), see Phobius details amino acids 339 to 359 (21 residues), see Phobius details amino acids 365 to 384 (20 residues), see Phobius details PF07690: MFS_1" amino acids 17 to 273 (257 residues), 111.4 bits, see alignment E=6.8e-36 amino acids 218 to 385 (168 residues), 43.1 bits, see alignment E=4e-15 PF06779: MFS_4" amino acids 31 to 381 (351 residues), 30.1 bits, see alignment E=5e-11 PF00083: Sugar_tr" amino acids 39 to 182 (144 residues), 48.8 bits, see alignment E=7.6e-17

Best Hits

Swiss-Prot: 100% identical to YGAY_ECO57: Uncharacterized transporter YgaY (ygaY) from Escherichia coli O157:H7

KEGG orthology group: None (inferred from 98% identity to efe:EFER_0390)

Predicted SEED Role

"MFS permease protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (394 amino acids)

>MCAODC_11325 Putative uncharacterized transporter YgaY (Escherichia coli ECRC101)
MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLSASSAGFIVTAAQLGYA
AGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMMILGTALTGLFSVVAQILV
PLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANLGGWRTVFWVASVLMALMALA
LWRGLPQMKSETHLNYPQLLGSVFSMFISNKILRTRALLGCLTFANFSILWTSMAFLLAA
PPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKSHHTTTFGLLLLLLSWLAIWFGHTS
VLALIIGILVLDLTVQGVHITNQTVIYRIHPDARNRLTAGYMTSYFIGGAAGSLISASAW
QHGGWAGVCLAGATIALVNLLVWWRGFHRQEAAN